KEGG   Esox lucius (northern pike): 105010716
Entry
105010716         CDS       T04894                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
els  Esox lucius (northern pike)
Pathway
els03020  RNA polymerase
els03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105010716 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    105010716 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:els03021]
    105010716 (polr2d)
   03400 DNA repair and recombination proteins [BR:els03400]
    105010716 (polr2d)
Transcription machinery [BR:els03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     105010716 (polr2d)
DNA repair and recombination proteins [BR:els03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105010716 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 105010716
NCBI-ProteinID: NP_001290634
UniProt: C1BXX5
LinkDB
Position
LG01:complement(17259932..17261184)
AA seq 143 aa
MASGGGSTTTVGDVEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELSE
VFMKTLNYTARFSRFKNRETIGSVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSLE
GRFEDEELQQILDDIQTKRSFQY
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcgtctggaggcggttcgacaacaactgtgggagatgttgaagaagatgcatcccag
cttctttttcctaaagagttcgagaacgcggagacacttttaaactccgaggtacacatg
cttctggagcatcgcaagcagcagaacgagagtgctgaggacgaacaagagctgtcggaa
gtcttcatgaaaactctgaactatactgcaaggttcagccggttcaaaaatagagaaact
attggcagtgtgcgcagtttactcttgcagaagaaattgcacaagtttgagctggcaagt
ttagccaacctgtgtccagaagcagcagaggaggccaaagccctcatccctagtctggag
ggccggttcgaggacgaggagctgcagcagatccttgatgacattcagaccaaaagaagt
ttccaatattga

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