Esox lucius (northern pike): 105010716
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Entry
105010716 CDS
T04894
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
els
Esox lucius (northern pike)
Pathway
els03020
RNA polymerase
els03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105010716 (polr2d)
09124 Replication and repair
03420 Nucleotide excision repair
105010716 (polr2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105010716 (polr2d)
03400 DNA repair and recombination proteins [BR:
els03400
]
105010716 (polr2d)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
105010716 (polr2d)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105010716 (polr2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Motif
Other DBs
NCBI-GeneID:
105010716
NCBI-ProteinID:
NP_001290634
UniProt:
C1BXX5
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All DBs
Position
LG01:complement(17259932..17261184)
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AA seq
143 aa
AA seq
DB search
MASGGGSTTTVGDVEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELSE
VFMKTLNYTARFSRFKNRETIGSVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSLE
GRFEDEELQQILDDIQTKRSFQY
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggaggcggttcgacaacaactgtgggagatgttgaagaagatgcatcccag
cttctttttcctaaagagttcgagaacgcggagacacttttaaactccgaggtacacatg
cttctggagcatcgcaagcagcagaacgagagtgctgaggacgaacaagagctgtcggaa
gtcttcatgaaaactctgaactatactgcaaggttcagccggttcaaaaatagagaaact
attggcagtgtgcgcagtttactcttgcagaagaaattgcacaagtttgagctggcaagt
ttagccaacctgtgtccagaagcagcagaggaggccaaagccctcatccctagtctggag
ggccggttcgaggacgaggagctgcagcagatccttgatgacattcagaccaaaagaagt
ttccaatattga
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