Esox lucius (northern pike): 105011108
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Entry
105011108 CDS
T04894
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
els
Esox lucius (northern pike)
Pathway
els04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105011108 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105011108 (rabgef1)
Membrane trafficking [BR:
els04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105011108 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
105011108 (rabgef1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Prenyltransf
CID_GANP
PIN_8
Motif
Other DBs
NCBI-GeneID:
105011108
NCBI-ProteinID:
XP_010869216
UniProt:
A0A6Q2Z9K6
LinkDB
All DBs
Position
LG07:15149090..15170177
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AA seq
539 aa
AA seq
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MSQRTERRGIHVDQSELLCNKGCGYYGNAAWQGLCSKCWREEYQRARQKQIQEDWALAEK
LQREEEAAYASIQGAQSQPQAQPQASLGTFSKFEEKKTNEKTRKVTTVKKFFSPSSRTAS
KKAPTEGEEKGTGLRDWRGMFTSPWEMGSPTEVLVARLRDNQEGKTPSPSISRQSSIETD
RASRDFVDFLKTMQKPGREVHKHSRTFIESMANKKDLGADELSEYVQDFYQNMSERLMTH
FKVSSENVERVMDEVEKYIMTRLYKSVFCPETSDDEKKDLATQKRIRALHWVDIQMLCVP
VDEEIPEVSENVVKAITDVIEMDSKRVPRDKLACITRCSKHIFSAIKITKSEPASADDFL
PTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNL
DPEDFERYMSGQASPRRPETDSSWPQVDPGPVVSSPALAKVYQNLELLSGLGGRQDRVLA
AAQSLQSDLMTWQESVGQEVQEIMEKYPLEIRPPAPSAIDSDVENDLLPPPLTPQVFAG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcggaccgagcgccgtgggatccacgtggaccagtcagagctgctctgcaac
aagggctgcggctactatggcaacgcggcttggcagggcctgtgctctaaatgctggcgg
gaagagtaccagagggctcgtcagaagcagatccaggaggactgggccctggctgagaaa
cttcagagggaggaggaggctgcctatgccagtatacaaggtgcccagtctcagccccag
gctcaaccacaggcttctctgggaacattttctaagtttgaggaaaagaagaccaatgag
aagacacgcaaagtgacgactgtgaagaagttcttcagtccctcatcacgtacagcctcc
aagaaagcccctactgagggagaggaaaaggggacaggcctcagagactggagaggaatg
tttacttccccttgggaaatgggctcccccactgaagtactggtggccagactcagagac
aaccaggaaggcaagacccccagcccctctattagtcgccagtccagcatcgagacggat
cgcgcctccagagattttgtggacttcctgaagaccatgcagaagcctggccgtgaggtc
cacaagcacagccgaaccttcatcgagagcatggctaacaaaaaggacttaggtgctgat
gagctgtctgagtatgtccaggacttctaccagaacatgtcagaacgcctaatgacccat
tttaaagtctcttcagagaatgtggagagagtgatggacgaagtggagaaatacataatg
actcgcctttataagagtgttttctgtcctgagacctcagacgatgagaaaaaagatctg
gccactcagaaaaggatacgggcattgcactgggtggacattcagatgctctgtgtgcca
gtggatgaggagatccccgaggtgtcagagaatgtggtcaaagcaataacagacgtcatt
gagatggactccaagcgggtccccagggataagctagcatgcatcacacgctgcagcaag
cacatcttcagcgccatcaagatcaccaagagtgagccagcctcggcagatgacttcctg
cccaccctgatctacattgtcctgaaggccaatcctccacgcctgcagtccaacatccag
tacatcacccgcttctgcaaccccagcaggcttatgaccggggaggatggatactacttc
accaacctgtgctgtgcagttgccttcatagagaaactggacgcccagtccctgaacttg
gaccctgaggactttgagcgctacatgtcgggccaggcctctcctcgcaggcctgagacg
gacagcagctggcctcaggtggaccctggccctgttgtctccagcccagccctggccaag
gtctaccagaacctggagctcttgtcgggactgggaggccgacaggacagggttctggcg
gcagcgcagagccttcagagcgacttgatgacctggcaggagagtgtggggcaagaggtc
caggagattatggagaagtacccgctggagatccgtcctcctgccccttctgccattgac
tccgacgtggaaaacgaccttctgccaccgcccctgacgccccaggtgtttgctgggtaa
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