Esox lucius (northern pike): 105011127
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Entry
105011127 CDS
T04894
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
els
Esox lucius (northern pike)
Pathway
els03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105011127 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
els03400
]
105011127 (uimc1)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
105011127 (uimc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
Motif
Other DBs
NCBI-GeneID:
105011127
NCBI-ProteinID:
XP_010869250
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All DBs
Position
LG07:complement(14566741..14582369)
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AA seq
1218 aa
AA seq
DB search
MPPRKKQQNRDTDDGPRKRRRGDEQNEDRVVISDSDEDEDFRSSREERKRESKTRSNEMT
EEEMLDLAMRLSEQEASSAALRQRQEEEAMRKAIAESLYVDSPTHHPAQKCPSSSPKEGS
SIQPLRRKLSYPNNGVADGDEACHVGVACPDGERGKRSPLPDMPDFSQTQNVNSQFPPLS
QDSTSETLHSTQEGPSQKKPVEDLSDKAMESQDCSYSTKSESQSQLSKKSSVFPFTMVSY
TCKPVLCLEKLSQDLLVDGQASGILLKDNPKLTLPIMSQISQSSQPKSPVFSKSPVFSKS
PVFSKSPVFSKSPVFSKIDKDLDKEPGQGSLMFSQSSETDSGKDEKEACPIFLKNTMFSS
SDTGEEEKEASPTFPRSPVFIKTNREQVEDQHVPTLTKSHVFSKTIRGPEEKERSPTFPK
SPVFSRGDQGPQTRVECLSTTNDNVDREGPPDCSSPAVKSRDPSPCLLPSPRTTLSLYKR
LVPLRRAPRVADKVAHPDKQEGESSQGAVTTVSTRLEDDLPLGLETQPIPEMTSDMVLRW
SDDDGDADGKDVPATLSPSPSPVFPEEKSLPQPSVQGLPGSTRHRLSPAYSPGLVLDKHD
LPSQDPACQEGERKNVRRKFTFKGMYGASPLSLPGQAAARGNQDWVPGGCPSSQQSLASS
SRLSRPTDSHGDKGVIRYYWGVPFCPRGQNPDTYTQVILSQLEVYEKSLKVAQRGLLRKT
VWGEPVLPGPPERPFSLRGRPKRHRAPQLVEDEEEDEDGVRGEKQHEEEVVEVLDDDDEE
EEERAKRERQPSPKGREVRGRRGRLEWKEPQEVFVYSPDHQEKSPSPALHAESSEQQILP
RRRLSLRKEVRRLVETQPPEPLENWEQEEDAKKGDAERDGENSEGGMGGDEKREGVSGEV
EVDVGGLEVPETQLSDDSSQELMVTSPPQPQPESQFLPQIQIFLSSPHPLEQPEEGMEVD
GEESKTSLGGCPAPGEDVRMEEEQEREVHRGVPEPAPQQTPGVDCPMCMRSFPLTEVEMH
AAYCDGSSANLQEEEMMAQEVQSQVKACRKRTRRGELIGEEQPSSSGSSKRGQTEKCYVC
QQLFPLRDYGKHVEDCIKNKPVSRAASRVEQSGHLLRALEQTEHRSSVNAETRPCDTTFQ
NQHSDQAGDLEVAESGGSGDFTAPGFVVSTSPIRSFTSISEATDCLIDFKHQYSSSTTTS
SSSRTSQRGKKFKRKFKR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgcctccacggaaaaagcaacagaacagagacacagatgacggtcccaggaaacgacga
cgaggagatgaacaaaacgaggacagagttgtcatatcagacagcgacgaggatgaagac
ttcagatcatctagagaggagcgcaaacgggaaagtaaaaccagatcaaatgagatgaca
gaggaggagatgctggacttggccatgaggctgagtgaacaggaggccagcagcgctgct
ctcaggcaacgacaggaggaggaggccatgaggaaggccattgctgaaagcctctacgtg
gacagccccactcatcaccctgcccaaaaatgtccaagttcttctccaaaggaggggagc
agtatacagcccctgaggcgcaagctctcctaccccaataatggtgtggctgacggggat
gaagcctgccatgtaggggtggcatgccctgatggggaaagggggaagagaagcccttta
ccagatatgcctgacttctctcagacccagaatgtcaactcccagttccctcccctcagc
caagattccacctcagagactttacattccacgcaggagggcccctctcagaagaagcct
gttgaagacctctcagacaaagccatggaatctcaggactgcagctactccacaaagagt
gaatcccagtcccaactctcgaaaaagtcctctgtattccctttcactatggtttcctat
acctgcaaacctgtgctctgtctggagaagcttagccaggacctcctcgtagacggtcag
gcctctgggatcctactaaaggataatcccaaattaacccttcctataatgtctcagatt
tctcaatcttctcagcccaaaagccccgtgttctccaaaagccccgtgttctccaaaagc
cccgtgttctccaaaagccccgtgttctccaaaagccctgtgttctctaagatagataaa
gatttagacaaggaaccaggccaagggagtctcatgttttctcaaagttctgaaactgat
tccggaaaggatgaaaaagaggcctgtccaatttttcttaaaaacaccatgttctccagc
agtgatacaggagaggaagagaaagaagcctctcccacctttcccagaagtccagtcttc
attaaaaccaatagagaacaagtagaagaccaacatgttccaactttgaccaaaagccat
gtcttctctaagacaatcagaggaccagaagagaaagagaggagtcccaccttccccaaa
agtcctgtcttttccagaggtgatcagggtccacagacccgtgttgaatgtctgtctaca
acaaatgacaatgtagacagagagggtcctccagactgttcaagccctgctgtgaagagc
agagatccatcaccgtgccttctgccaagccccagaacaacactgtccctgtacaagaga
cttgtgcctttaaggagggcccctcgggtagcagataaagttgctcacccagacaaacaa
gagggtgaatcctcacagggagctgtaaccacagtcagcacccggttagaagacgacctt
ccgctgggtctggagactcagccaatcccggagatgaccagtgatatggtgctacgctgg
tcggatgacgacggcgacgccgacgggaaagatgttcctgcaacgctgtctccttcaccc
agccccgtcttccccgaggagaaaagcctcccgcaaccaagtgtccagggtctacctggt
tccacccgccaccgcctttcccctgcatacagcccgggcctcgttctcgacaaacacgac
ctcccatcccaagaccccgcatgccaggagggggagaggaagaacgtgcgcaggaagttc
accttcaaaggcatgtatggagcctctccgctctctctccccggacaggctgcagcaaga
gggaaccaagattgggtccctggcggatgtccctcttcccagcagtccttggcctcctct
agccgcctctcccgccccacggacagccatggtgacaagggagtgatccgctactactgg
ggcgtgcctttctgtccgcggggccagaacccagacacatacacacaggtgatcctgtcc
cagctggaggtgtatgaaaagagtctaaaggttgcccagaggggtctgttgaggaagacc
gtctggggggagccggtcctccctgggcctccggagagacccttctccttgaggggacgg
cctaagaggcacagggccccacaacttgttgaggacgaggaggaggatgaagatggtgtg
agaggggaaaaacaacatgaagaagaggtagtggaagtgctagatgatgatgatgaggag
gaggaggagagagcaaaaagggagaggcagccatcaccgaaggggagggaagtgagaggg
aggagaggaagactggagtggaaggaacctcaggaagtgtttgtgtactctcctgaccac
caggagaagtctccctctcctgcattacatgcagaatccagtgaacaacaaattctacct
cgaaggagacttagccttagaaaggaagtgagaagactagtagaaacacaacctcctgaa
ccactggaaaactgggagcaggaggaggatgcaaagaagggggatgctgaacgagatgga
gagaattcagaaggaggcatgggaggagacgagaagagggaaggagtgtcgggtgaagtg
gaggtggatgtaggtggcttggaggttccagagactcaactcagtgatgacagctcccaa
gagctgatggttaccagccctccacagccccagccagagagccagttcctgcctcagatc
cagatctttctctcctcaccccatcccctggagcaacctgaagaggggatggaggtggat
ggagaggagagtaagaccagcctgggggggtgtcctgcccctggggaggatgtgaggatg
gaggaggagcaggagagggaggtacacaggggtgtcccggagcctgccccccaacagacc
cccggcgtggactgtcccatgtgcatgcgctccttccccctgacggaggttgagatgcac
gctgcctactgtgacggtagtagtgccaacctgcaggaagaggagatgatggcccaagag
gtccagtcacaagtgaaggcttgtaggaaaagaaccagaagaggagagctcattggagag
gaacagcccagctcttctggctctagcaagagggggcagacagagaagtgctatgtttgt
cagcagttgtttcctttgagggactatgggaagcatgtggaggactgcatcaagaacaaa
ccggtctccagggctgcatcaagggttgaacagagtggacacttgctgagagcattggag
cagacagaacacagaagttcagtgaatgctgagacaagaccatgtgacactaccttccag
aaccaacacagtgaccaggcaggtgatctggaagtagcggagtctgggggaagtggagac
ttcacggccccaggtttcgtagtgagcacctcgcccattcggtcgttcacctcgatctcc
gaagccacagactgccttatagacttcaaacatcaatactcttcctctacaaccacctct
tcctcctccagaaccagccaaagagggaagaaatttaagaggaaattcaaacgatag
DBGET
integrated database retrieval system
