Esox lucius (northern pike): 105011315
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Entry
105011315 CDS
T04894
Symbol
sox30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105011315 (sox30)
Transcription factors [BR:
els03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105011315 (sox30)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105011315
NCBI-ProteinID:
XP_010869546
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Position
LG07:5466565..5472241
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AA seq
609 aa
AA seq
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MDSHPKRRAQVKSAVMKSEVQKDDWPSTSNGASVGEVTPCGGHKKPVGRPKSSSQVTPKV
DKCGGNGNQMPISLTHIKGDIRGRPVKFKKERASAVSKESKGASDHPTNVTSQVPVIKEE
IITPVPGLFKETEEPNSHRGNQHAAPTIDFSKPIHIVNADGMSFTAFDGKAITLSKVPYP
PPVHVYVKPATDKVNTRGINLTRPPSEAEHLEVPHSIDRNGNIKRPMNAFMVWARIHRPS
LSKANPTANNADISVQLGIEWSKLTEEERRPYYDEAHKLKNKHRQDFPGWIYQPRPGKKK
CYPSGPMSYGPQPSRCSAERSVIRDETHPMNAMTGASPTTSTFIPDTQATDSNGHCVKVA
TTEAKNASQSTSPFSLLKTYSFPSPHSAAPSSGSEHAVGRQEASHSCRIPEESLKPRTII
RQQTYYSCASDVPSISTAPRSRVLQMPLPALAQPHLYPPSPVMHPVNFFQTPRFSFAPPY
FMPAPQFYPPGSYPFGPYPVLQPQEFSTMASPITTPGYPYDDNYNQHESTFSMFNRDHPF
QQRGHSWPSRQGQWQATVTSELLGSVPPLDGRTLENVFTNSVPENPASVQEVQVTSEQDR
EEVRLMTIL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggacagccatcccaagcgaagagcacaagttaaaagcgctgtgatgaaaagtgaagtg
caaaaggatgattggccttcaactagtaatggcgccagtgtaggcgaggtcactccgtgt
ggtggacataagaaaccggtgggtaggcctaaaagcagcagtcaggttacaccaaaagtt
gataaatgtggtggtaatggaaatcaaatgccgatcagtttaacacacatcaagggagac
attcgaggtcgacctgttaaatttaaaaaggaaagggcatcagcagtcagtaaagagagc
aaaggagcatctgaccatccaacaaatgttacctctcaagtacctgtcattaaggaggag
atcattacacctgttccaggtctgttcaaagaaacggaagaaccaaatagccatcgagga
aatcaacatgcggctcccactatagacttctccaaaccaatccatattgtaaatgcagat
gggatgtcctttacagcatttgatggtaaagccataacgctcagcaaagttccatatcca
ccaccagttcatgtgtatgttaagccagccacagacaaggtaaacactagagggataaat
ctcaccaggccaccatcagaagcagaacatttggaagtaccacacagcatagacagaaat
ggcaacatcaagagacctatgaatgcgttcatggtctgggccagaatccacaggccttcc
ctgtccaaagccaacccaacagcgaacaatgcagacatcagcgtgcagctcgggatagag
tggagcaaactcaccgaagaagagaggaggccctactatgatgaagcacataaactgaaa
aacaagcacaggcaggacttccccggttggatctatcagcccagacccgggaaaaaaaag
tgctacccctctggaccgatgtcctatggtcctcaaccctcccgttgctctgcagagaga
agtgttatcagggatgagactcatcccatgaatgcgatgaccggggcctcccctaccaca
agcacttttattccagatacacaggccacagattctaatggccattgtgtcaaagtggct
acaacagaagctaaaaatgcctctcagagtaccagcccgttctctcttctgaagacctat
tccttcccgagtcctcactcagcagccccatcctccggtagtgagcatgcagtaggcagg
caggaagccagccactcctgcagaatccctgaagagtctctgaagccaaggacaatcatc
aggcagcagacatactacagctgtgctagtgatgttccctctataagcacggcaccaaga
tccagagttctgcagatgcctctccctgcgctagctcagcctcacctgtatcccccgtct
ccggtgatgcatccagtcaactttttccaaacacctcgcttttcctttgcgccaccttac
ttcatgcctgctcctcagttttatccaccaggatcctaccctttcggcccgtacccagtt
ctccaaccccaggagttctcaaccatggcgtctcccattactactccaggctatccctac
gatgacaactacaatcagcatgagtccaccttctccatgttcaacagagaccacccgttt
cagcagagagggcacagctggccgagccgtcaaggtcaatggcaggccaccgttacctct
gagctcctgggttcggtgcccccactggacgggcgtaccctggagaatgtcttcaccaac
tctgtgccagagaaccctgccagcgttcaggaggtccaagttaccagtgagcaggacagg
gaagaagtgcgcttgatgacaattctatag
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