Esox lucius (northern pike): 105011410
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Entry
105011410 CDS
T04894
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105011410
03041 Spliceosome [BR:
els03041
]
105011410
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105011410
Spliceosome [BR:
els03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105011410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
105011410
NCBI-ProteinID:
XP_010869706
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Position
LG08:8523151..8539989
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AA seq
577 aa
AA seq
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MDGRLETDLYPMGSTYVTELDSVHDITVGTKRGSDELFSCVANGPYIMTSSAANGNDSKK
FKGDIRSPGIPSRVIHVRKLPNDINEAEVIALGLPFGKVTNLLMLKGKNQAFLEMNSEDA
AQTMVSYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGGLPMAG
GLPMTAVDASGGMGGHSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQA
LLQYADGLTAQHAKLSLDGQNIYNACCTLRINFSKLTSLNVKYNNDKSRDYTRPDLPTGD
SQPSIDHQAMAAAFGEYYGAPGIISANPYTGAHAFPPAFTIQQAAGLTMQGVPGGLAQLT
MPGAAAAAAVRGLGFHQLSGGHCVMLVSNLNPERVTPQCLFILFGVYGDVMRVKILFNKK
ENALIQMTDGTQAQLAMSHLNGQRLHGKALRVTLSKHTNVQLPREGHEDQGLTKDYSNSP
LHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDLKMLFASSGAMVKAFKFFQKDRKMA
LVQMGSVEEAIESLIEFHNHDLGENHHLRVSFSKSTI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgtctagagactgatttgtatcctatgggatctacttacgtcactgaacta
gacagtgtccacgatattacagttggtacaaagagaggatcagacgagcttttctcttgt
gtcgcaaacggcccctatataatgaccagttcagcagccaatggcaatgacagcaaaaag
ttcaaaggtgacataaggagcccaggcatcccgtcgcgcgtcatccatgtccgcaagctc
cccaatgacatcaatgaggctgaggtcatcgccctgggcctgccctttggcaaagtcacc
aacctgctcatgctcaaaggaaagaaccaggccttcctggagatgaacagtgaagatgca
gcccagaccatggtcagctactattcctctgtgacgcccgtcatccgcaaccaccccatc
tttatgcagtactccaaccacaaggagctgaagacagacaactccccgaaccaagtgagg
gcccaggcggcgctgcaggcagtgaacgcggtgcagaccgggggcctgcccatggccggg
ggcctgcccatgacggcggtggacgcttcgggcggtatgggggggcatagcccggtgctg
cgtgtcattgtggagaacctcttctacccggtcaccctggatgtgctgcatcagatcttt
tccaagtttggcactgtgttgaagatcattactttcaccaagaacaaccagttccaagcc
ctgctgcagtatgctgatggcctcactgctcagcatgctaaactgtctttagacgggcag
aacatctacaatgcctgctgcacccttcgcatcaacttctccaagctcaccagcctgaat
gtcaagtacaacaacgacaagagccgtgactacacacgccctgacctgcccacgggagac
agccagccctccatcgaccaccaggcaatggctgcagccttcggtgagtactatggtgct
cctgggatcatctctgccaacccgtacaccggggcccatgcctttcccccagccttcacc
atccagcaggctgcaggcctgaccatgcaaggtgttcctggcggcctggcccagctgacc
atgccaggggctgcggccgccgcagctgtccgaggactcggcttccaccaactgtccggt
ggccactgtgtcatgctggtcagcaacctcaacccggagagagttacgccccaatgcctc
tttattcttttcggtgtatatggtgatgtgatgagagtgaagattctgttcaacaagaag
gagaatgctctgatccagatgaccgatgggacccaggctcagctcgcaatgagccatctg
aatggccagagattgcatgggaaagccctgcgtgtcaccctgtccaaacataccaacgtt
cagcttcctcgcgagggccacgaggaccagggcctgacgaaggactacagcaattcaccc
ctgcaccgcttcaagaagcccggctccaagaactactccaatatattcccgccctcggct
actctgcacctttcaaatatcccgccctctgtggttgaagatgacctcaagatgcttttt
gcaagctctggtgcaatggtgaaggccttcaagttttttcaaaaagaccgcaagatggcc
ttggttcagatgggctcagtggaggaggccatagagtccctgattgagttccacaatcac
gacctgggagaaaaccaccacctgagggtctctttttccaaatccaccatctga
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