Esox lucius (northern pike): 105011642
Help
Entry
105011642 CDS
T04894
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
els
Esox lucius (northern pike)
Pathway
els03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105011642 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
els03009
]
105011642 (rexo1)
Ribosome biogenesis [BR:
els03009
]
Eukaryotic type
Pre-60S particles
RNases
105011642 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
zf-like
Motif
Other DBs
NCBI-GeneID:
105011642
NCBI-ProteinID:
XP_010870140
LinkDB
All DBs
Position
LG08:14777749..14788811
Genome browser
AA seq
1316 aa
AA seq
DB search
MLRSTGFFRGIDCPFYTDNVSCNGKTKSNKDGCKRPYCHFRHSKQRRSYVSNEIKKSKEL
YSIQKEQGGYDPFNPEVVRPEEQKNGEPASATVDVGALELELVNRAIEEVRSEVEWEKKK
LSRIGDQEYDPTSSSPKLVIKQPKPVSQTGDQKYDPTTSSPKTVVKRPKPPAAASHLAYD
PGRYQMTSTVDYNPTPRSSKYTLDPEGKNIHASSMEYVPTSVTKTAVKNPTPEIPSSPTS
PKYSSNASPSKNKYTVDHSKPSTDMEYDPLSNYSAKIAGNNKKDQRTCASKGEGKKRLHH
SGTEKRSTDEEYVPTIKKPRQVIPDPLKYTARFSESDEESSGTEYRPTSLSRLQRRKSSS
GSVEEATVPDKGERTEAAPVRLKQHSRQYSKEQEDAAPWESEDSENHEVARQRDKSVTEK
VPAKTIHTKSSKVEKVHTSEKESSKRTGVGGGGSGKEKVAGDGKKKSDSKKLIHESDKKD
SKNQAKKDEKRKMKDKSIDKSKKEGKEEKRGDGKSKIRADKAKGVSSKREKGDGDNKTSK
ISDKEKGSSKLNEHKNGNHDSSGKEKDPKKVGKASSNSSKCKVKKSDSSSPNGKTGKVKQ
RSLSHVDLFGDESADDKSEEEEEEETIVRKSAAAFKRGSLNKRKVSELTPSSSEDEDAGA
EDDRGYDDTYGVRVDYSGLQVDLDFDLDDDPMEECLRIFNESKDIKTEDKGRQLKLSKDS
EDEEATDNNLTTLFPGQKKRVSHFSAKGSTEVTPKPPPYRRLTAQEICYQRMQIAQQQAA
QLAAAVKTASATAPRPRPTSNPFPGERKRVAHRPTPLPSSSKSAAGLAEAKPAGSRVLSP
VRTLPGGLSVKAQTSAGILSKTTTTVVQKRVAHTPTMKSSAMKRPVIPTEFGAKVPTNIR
QRYLNNFIDEFLKFCPSEDLAFQMALEEEKVVYDRSSSKNIYLNVAVNTLKKLRSKSSAP
VPAVAMPNQPARLTGSPAVAGNRKAQSHEEVLGGRLAAKTSFTINRTGKQLEEKLSGVIL
YRKLKDYLMTEEQLKEHGYPRPHPERSGRAVVHNLPEKKNVDAFSKVCCRCGAEYKINAN
GGCVRKEECHHHWGRLRRHKVSGGWETNYNCCSGAVGSPGCSVSTQHVQDGRKESLDGFV
QTFEKQLPADGNGGVYALDCEMCYTKQGLELTRVTVINSELKVIYDTFVKPESKVVDYNT
RFSGVTEEDLENATITLRDVQAVMLNMFNAESILIGHSLESDLFALKIIHSTVVDTAIIF
PHRLGLPYKRALRNLMADHLKRIIQDSVDGHDSSEDACACMQLMMWKIREDAKVKR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgctgagatccaccggtttcttccgtgggattgactgcccgttttacacggataacgtt
agctgcaacgggaaaacaaaaagcaacaaagatgggtgcaaaagaccttactgtcatttc
agacacagcaaacagagacgatcttatgtatcaaatgagattaaaaaatcaaaagaactt
tactccatacaaaaggagcaaggtggctatgacccattcaacccagaggtagtgagacct
gaggagcagaagaatggggagcctgcttctgcaacagtggatgttggtgccctggaactt
gaattggttaaccgtgccatcgaagaggtacgcagtgaggtggagtgggaaaagaagaag
ctctcacgaatcggggaccaggaatatgaccctaccagcagttctcccaaattggttatc
aaacagccaaaaccagtctcacaaacaggggaccagaaatatgaccctaccaccagttct
cctaaaacggtggttaaacgtccaaaaccaccggctgctgcatctcacttggcgtatgat
ccaggcagataccagatgacctcaacggtggattacaaccccacccctcgctccagtaag
tacaccttggaccctgagggcaagaacatccatgccagctccatggaatatgtgcccacg
tcagttaccaaaaccgctgtgaaaaatcctactcctgaaataccctcttcccccactagt
cctaagtactcctctaatgcatccccctccaagaacaagtacacagtggatcattctaaa
ccatccacagacatggaatatgaccctctctccaactattcagctaaaattgctggcaat
aataagaaagaccagaggacatgtgcttctaagggtgaagggaaaaagagacttcaccat
tcagggacagagaagcgatcaacggatgaggaatacgtcccgaccattaagaagcctcga
caagtgataccggacccactgaagtacaccgcccgtttttctgagtctgatgaggaaagc
tctgggacggagtatcggcccacctctttaagccgcctgcaaaggaggaagagcagcagt
gggtcagttgaggaggccactgttccagataaaggggagaggacagaggcagccccggtt
aggttaaaacaacacagtagacagtattctaaagagcaggaggacgccgcgccctgggag
tcggaggactcagagaaccacgaagtagctaggcaaagagacaagtcagtgacagaaaaa
gtgccagctaaaacgatccatacaaagagcagcaaagtagagaaggtgcatacatctgaa
aaggagtcaagtaaaaggactggtgttggtggtgggggcagcggtaaagagaaagtagca
ggggatggtaagaaaaaatctgattcaaagaaattaatccatgaatctgacaaaaaggac
agcaagaatcaggcaaagaaggatgagaaaagaaagatgaaggataaatccatagacaaa
agcaagaaagagggaaaggaagaaaaaagaggcgacggaaagagtaagatcagggcagac
aaagcaaaaggagtgtcaagtaagagagaaaagggggatggtgacaataaaacatccaag
atttcagacaaggaaaagggctcttctaaattgaatgaacacaagaatggtaatcatgac
agcagtggaaaagagaaggaccccaagaaagttgggaaagcgagttccaacagcagtaaa
tgcaaggtgaagaaaagtgacagcagctcccccaatggcaagacgggtaaggtgaaacaa
agatctctgagtcacgttgatctgtttggggatgaaagtgcagatgacaaaagtgaggag
gaggaggaggaggaaacaattgtgaggaagtcagctgctgctttcaagagaggcagttta
aataagaggaaggtctctgagctcaccccctcatcctccgaggatgaggacgctggtgcg
gaagatgacaggggctatgatgacacgtatggtgtgcgtgtggactactccggtctgcag
gtggacctggactttgacctcgatgatgatccaatggaagagtgcttacggatcttcaat
gagtccaaggatattaagaccgaggacaagggaagacaattgaagctctctaaagattca
gaggatgaagaggccacagataacaatctgaccactctctttcctggtcagaagaagagg
gtttcacatttttctgcaaaaggaagtactgaggtgaccccgaagcctccgccatacagg
aggcttactgcccaagagatctgttaccagcgcatgcagattgcccagcagcaggctgcc
cagcttgctgcagccgttaagaccgcctctgccaccgcacccagacccaggcccacctcg
aaccccttccccggggagaggaagagagtagcgcaccgccccacccctttaccatcctcc
tccaagtccgctgcagggcttgcagaggctaagccagcgggcagcagagtgttgtctccg
gtgaggaccctcccaggaggcctgtctgtgaaggcccaaacatcagctggaatcctgtca
aagaccaccaccactgtcgtacagaagagagtggcacacactcccacaatgaagagctct
gcaatgaagcgtcctgtgattcccaccgagtttggggcgaaagtgcccactaacatccgt
cagcgctacctcaacaactttatagatgagtttctgaaattctgcccctctgaagacttg
gccttccaaatggccctggaagaggagaaggtggtgtatgaccggagcagcagtaagaac
atctacctcaatgtggcagtcaacacactgaaaaaactgcgcagcaagagcagcgccccg
gttccagccgttgccatgcctaatcagccagcccgtctcacagggagccccgcagtggcg
gggaacaggaaggcccagtcccatgaggaggtgcttgggggacggctcgcagccaagacc
agcttcaccatcaacaggaccggcaagcagctggaggagaaactcagcggtgtcattctg
tacaggaaactaaaggactatctgatgacggaggaacaacttaaggagcatggataccct
aggccacatcctgaacgctctggtagagcggtggttcacaatctaccagagaagaagaat
gttgatgcattttccaaggtgtgctgtcgatgtggggcagagtataagatcaacgccaat
ggtggctgtgttcgcaaggaagagtgccatcaccactggggccgtctgcggagacataaa
gtatcaggaggctgggagaccaactacaactgctgttccggggccgtgggctctccaggc
tgctcagtgtctacgcaacatgttcaagatggacgcaaagagtctctggacggctttgtt
cagacctttgagaaacagctgcccgcggatggcaacgggggtgtctacgccctggactgt
gagatgtgctacacaaagcagggtctggagctgacccgggtgaccgtcatcaactctgag
ctgaaagtcatctacgacacgttcgtcaaacctgagagcaaagtggtggactacaacaca
cggttttcgggtgtaacagaggaggacctagagaacgccaccatcaccctgagagatgtg
caggcggtgatgctcaacatgttcaatgctgagtccatcctgatagggcacagcctggag
agtgacctgtttgccctcaagatcattcacagtactgtagtggacacggccatcattttc
ccccatcgcctgggcttgccttacaaacgggccctgaggaaccttatggcagaccatctc
aaacgcatcatacaggacagtgtcgacggccatgactccagtgaggacgcttgcgcctgc
atgcagctcatgatgtggaagatccgtgaagacgccaaggtgaagagatga
DBGET
integrated database retrieval system
