Esox lucius (northern pike): 105011707
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Entry
105011707 CDS
T04894
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
els
Esox lucius (northern pike)
Pathway
els03030
DNA replication
els03410
Base excision repair
els03420
Nucleotide excision repair
els03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105011707 (rfc4)
03410 Base excision repair
105011707 (rfc4)
03420 Nucleotide excision repair
105011707 (rfc4)
03430 Mismatch repair
105011707 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
els03032
]
105011707 (rfc4)
03036 Chromosome and associated proteins [BR:
els03036
]
105011707 (rfc4)
03400 DNA repair and recombination proteins [BR:
els03400
]
105011707 (rfc4)
DNA replication proteins [BR:
els03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105011707 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
105011707 (rfc4)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105011707 (rfc4)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105011707 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
105011707 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
AAA_lid_RFC1
DNA_pol3_delta2
Rad17
AAA_16
AAA_assoc_2
AAA_30
AAA_11
AAA_22
Mg_chelatase
DUF815
SLFN-g3_helicase
Gp44_lid
RuvB_N
AAA_14
AAA_5
ResIII
AAA_28
AAA_24
DNAX_ATPase_lid
AAA_19
Cdc6_lid
RPA_interact_N
AAA_7
Kinesin
ATPase_2
AAA_3
Motif
Other DBs
NCBI-GeneID:
105011707
NCBI-ProteinID:
XP_010870260
LinkDB
All DBs
Position
LG08:17710180..17713724
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGTSSQSTRPLKEKGGGTSGEKKQKSVPWVEKYRPKCMEEVAYQEEVVAVLKRTI
EGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKRF
AQLTVAGHRTDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYVSRI
IEPLTSRCSKFRFKPLANQVQEERLLDICTKENLKYSKEAIAALVKVSEGDLRKAITFLQ
SAARLNTDNDITESDVIEIAGVVPPKMIDNLLKICYKGTFEKLEISVRNMVDEGYAATQI
INQLHEAVIEEELNDKQKSAITEKMAEVDKCLVDGADEYLQMLSLCSVIMQQASQPN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaacatcttcccaaagcaccagacctttgaaagagaaaggt
ggtgggaccagtggggagaagaagcagaagtctgttccctgggttgaaaaatacagacca
aaatgtatggaagaggtggcttatcaagaagaggttgttgctgtgcttaagaggactata
gagggcgctgatctccccaatctgttgttctatggaccacctggaacaggaaagacctcc
accatcctggctgctgcaagggaactttatggacctgagctgtaccgtcagagagtgctg
gagctgaatgcctctgatgagagagggattcaggtggtgagggagaaggtcaagagattt
gctcagctgactgtagcaggacaccgcacagatgggaaaccatgtccgccctttaagatc
atcatcctggatgaggctgattctatgaccaatgctgctcaggctgctctgagacgcacc
atggagaaggaatccaggaccacccgcttctgtctcatctgcaactatgtcagccggatt
atagaacccttgacatccagatgctccaaattccgcttcaaaccactagccaatcaggtc
caagaagagcgcctcctggatatttgtaccaaggagaatttgaaatactcaaaagaggca
attgcagcgttggttaaggtttcagagggagatctgcgaaaagccataacctttcttcaa
agtgcagcgcggctgaacacggacaatgacatcactgagagtgatgtaattgagattgca
ggggtagttcccccaaagatgattgacaatttgctgaaaatctgttacaagggcacattt
gaaaaacttgagatttctgttcggaacatggtagatgagggctatgccgcaacacagatc
atcaaccagctacacgaagctgtcatagaggaggagctgaatgacaagcagaagtctgcc
ataacagaaaagatggcagaggtcgacaagtgtttagtggacggtgccgatgagtacctg
cagatgctaagcctgtgttcagtgataatgcagcaagccagccagcctaactga
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