Esox lucius (northern pike): 105011868
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Entry
105011868 CDS
T04894
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1 isoform X1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
els01009
]
105011868 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105011868 (sh3rf1)
Enzymes [BR:
els01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105011868 (sh3rf1)
Protein phosphatases and associated proteins [BR:
els01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105011868 (sh3rf1)
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105011868 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
Prok-RING_4
zf-Nse
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
105011868
NCBI-ProteinID:
XP_012990467
LinkDB
All DBs
Position
LG08:20718777..20757125
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AA seq
843 aa
AA seq
DB search
MDESVLLDLLECPVCLERLDATAKVLPCQHTFCRRCLQGILGSRGELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRAGPVAAVCVNGTAGVRVQGSGPRDPGAQPQRAQAKSTP
VRGVLQLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEMGGVHGFFPTNFVQ
IIKPLPQPPPQCKALYDFELKDKEADKDCLPFTKDDILTVIRRVDENWAEGMLGDKIGIF
PISYVEFNSAARQLIELDKPGDSSGDSGEGASSGPLSNGGPHRAGEKKNTKKRHSFTSLT
MSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARIGELSGGLSCSAPSQVHICTTGLIVT
PPPSSPVTTATVFTFPPETSYASIPVDALPPPPPPPPQSSAVGAASSLAASQRPSPSTSD
QSGRQRPTVYVALFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFPGNY
MSPVSRTASGNSQTKTPLALVTQAGRGVTIVSPSSATLGTVVPDFNKPLPVCPGPSCPVP
VGGVTAGHVATGQAKALMHVTSQMTVNQARNAVRTAACHSQDRPTAAVTPIQCQPSTSSN
AAQGCVRAGPPLGCAAASLTPPNVSAASLDSESLRTSAVLSVPAAPTNGSAATANSFLAC
RLDKDGKREKKGLLKLLSSNKKKSRPSPPSSPTLEAEQAATGEVFQGAAGPEASPSSSAG
PHGRTVICPGEPETAAAAASSSSSSAPELSHRKISPLDGCAPIAPPPRQACSSLISQQHD
ARPIICERYRVVVSYPPQSEAELELKEGDIVFVHRKRDDGWFKGTLQRNGRTGLFPGSFV
DSI
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtctgtgctgttggacttgctggagtgccctgtgtgtttggagcggctggat
gccacagccaaggtcctcccctgccaacacaccttctgccgccgctgccttcagggcatt
ctgggctcccggggagagcttcgctgcccagagtgccgtacgctggtggagtgtgctgtg
gatgagctgcccagcaacatcctcctggttcgcctgctggacggcatcaaacagaggccg
cgcagggcggggcccgtcgccgcggtctgcgtgaatggcacggccggggtcagggttcag
ggtagtggacccagagacccaggagcacagccacagagagcccaggccaagagcaccccg
gtgaggggagttcttcagctgccctgtgccaaggccctgtacaactatgatggcaaggag
ccaggggacctcaagttcagcaagggtgacatcatcatcctgcgacgccaggtggacgag
aactggtaccacggggagatgggtggagtccatggcttctttcccaccaacttcgtccag
atcatcaagcctctgccccagcccccaccccagtgcaaggccctgtacgactttgagctc
aaagacaaggaggcggacaaggactgcctgcccttcactaaggatgatattctgactgtg
attcgcagagtggatgaaaactgggcggagggaatgttgggggataaaattggaatcttc
cccatatcatatgttgagttcaactctgcggcccgccagctgattgagctggacaagccc
ggggactccagcggggattctggcgagggggcctcgtcgggccccctgagtaatggtggc
ccccaccgggccggggagaagaagaacaccaagaaacgccactcgttcacctcgctcacc
atgtcccacaagccctgcctcgccccacctccccaaaggcactccatggagatcagcggg
ccggtcctgatcagctcgtccaaccccacggccgcggcacgcatcggggagctcagcgga
ggactgtcctgtagcgccccctctcaggtacacatctgtacaactggactcatagtgacc
cctccccccagcagtccggtgaccacggcaacggtgttcacattccccccggagaccagc
tacgcgtccatccctgtggatgcgctccctcctcccccgcctcctcccccacaatcctca
gctgtgggagccgcctcctcgttggctgccagtcagaggccatctccaagcaccagcgac
cagagtggcagacaaagacctacagtctacgtggccctgttcccctacactccccgtaaa
gaggacgagctggagctgaggaagggggagatgttcctggttctggagcgctgtcaggac
ggatggttcaaaggcacctccatgcacacgggcaagatcggagtgttccccgggaactac
atgagccctgtcagcaggacggcgtcaggcaacagccagaccaaaacgcccctggctctg
gtaacccaggctgggcggggggtcaccatcgtcagcccctcctcagctaccctggggacc
gttgttccagacttcaacaagcccctccccgtctgcccaggcccctcctgcccggtaccc
gttggcggggtgacggctggtcatgtggcaacgggacaggccaaggcgctcatgcatgtg
acgtcacagatgacggtgaaccaggcgcggaacgctgtccggacagcggcttgccacagt
caggaccggcccacggctgccgtgacgcccatccagtgccagccctccacttcctccaac
gctgctcaaggctgtgtccgcgccgggcctccgcttggctgcgccgccgcctccctgacc
ccgcccaacgtcagcgccgcctccctggacagcgaatcccttcgaacgtcagcggtgctc
tccgtgcctgccgcccccaccaacggcagcgcggccacagccaactccttcctcgcctgt
aggctggacaaggatggcaagcgggaaaagaaaggtcttctgaagctgttgtcctccaac
aagaagaagtctcgcccctcgcctccctcttcccccaccctcgaggcggagcaggccgcc
acgggggaggtctttcagggtgcggcagggcctgaggcctccccctcgtcttccgcgggc
ccccacggtcgtacagtcatctgtccaggggagccggagactgctgcagccgccgcgtcc
tcttcgtcttcctcagccccagagctgtcccaccgtaagatcagccccctggatggctgt
gcccccatcgccccgccccctcgccaggcatgctcctccctcatctcccagcagcatgat
gcccggccaatcatatgcgaaaggtacagagtggtggtgtcctacccccctcaaagcgag
gcggagctggagctgaaggagggagacatagtgtttgtccacaggaagcgggatgacggc
tggtttaaaggaaccctccagaggaacggcagaaccggtctgttccccggcagctttgta
gacagcatctga
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