Esox lucius (northern pike): 105011884
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Entry
105011884 CDS
T04894
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
els
Esox lucius (northern pike)
Pathway
els03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105011884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105011884
03036 Chromosome and associated proteins [BR:
els03036
]
105011884
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105011884
Coactivators
SAGA/TFTC/STAGA complex
105011884
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105011884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Staph_reg_Sar_Rot
Motif
Other DBs
NCBI-GeneID:
105011884
NCBI-ProteinID:
XP_010870622
LinkDB
All DBs
Position
LG08:25002714..25022888
Genome browser
AA seq
767 aa
AA seq
DB search
MSSIETQNQEKKTCLSKPNGESGTANTSVTSACSVKVPVESSAHVHDHGQTKPQNAANST
DQPLLVTHAVTTSTVAISPVLASTQPITTAVNPTLSNTATKLVITTKGPRPISPLLVGSR
VSSPVVTVSAQPVLARMNAPLGPALTRVSTPSKIIAVPRATSIQQPAATIKPPQATSVQL
PANFQIPPGMVLIRSDSGQLMLVSQQALAQAQGLVARSAGIGAAPITRPPATQVSTAAVV
RKADNPAVIRMLPPPIPLETTAQRTIKAVGVAPTPSTSQSLTPQPVIRPVVPVTCPGPSS
LIIPNKLTNTPKATTPSITPEVLENVKKCKNFLVTLIKLASSGTHSFDMAKNVRELVKSL
LDGRLEPEEFTDQLYRELKSSPQPYLVPFLKKSLPVLRQLTPNPQLFIQEVYQSKASGRT
PALLSTNARPAHLNTASGQPMKSTALVIQQPGGVVCKPTVTSSGPARTYVSVQNRSLAKP
MVLQSGQHQNTVPLGAVVRRTPFQVPPPPAQRHLFKESVSSFREEDDINDVASMAGVNLT
EENARILATNSELVGSVVQSCCDEPFLAPGPLHTCILHTGKALGMSEVGSDVVNLVSQAT
QERLRDLLEKVTVVARHRQLALKEDFRHVQISDVRSQLRFLEELERLEKQRRDNDEREAL
LRIARSRCNAEDPDQQLLKQRARELQQLEQAQLEHREANLTALAAIGPRRKRPLDSAGSQ
VVPGGTVPVPRVSFQRVTRVSLRDLLFCLEQDPPLRHSLVLYKALLS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccatcgaaactcaaaatcaggaaaagaaaacctgcttaagtaagccaaatgga
gaaagtggaaccgctaatacctcggtcacttctgcgtgctcggtgaaagttccagtagaa
tcctctgcccacgtccatgaccatggtcaaacaaagccgcaaaatgctgccaattccacc
gaccagcccctgttagtgactcacgctgttaccacctccaccgtggccatctcacctgtt
ctggcaagcactcaacctattaccacagccgtaaacccgaccttaagtaacacggctaca
aagttggtgattacaaccaagggaccaagaccaatttctcctttgctcgtggggtcgaga
gtgagctctccagtagtgacggtgagcgcacaaccggtactggcccgcatgaacgcccct
ttgggaccagccttaactcgagtttccaccccgagtaaaatcatagctgtgccgagagca
acttccattcagcaaccagctgcaaccatcaaacccccacaggccacgtctgttcagctt
ccagccaactttcaaatcccgccaggcatggtgctcattcgtagtgacagtggtcagctg
atgctcgtgtcccaacaagccttagctcaagcccagggccttgtggccagaagtgctggc
atcggggctgctcctatcaccaggccacctgctacacaggtgtccacggcagctgttgtg
agaaaagcagataatccagcggtgatcaggatgctcccacctcctatcccccttgagacc
acagcccaaagaactattaaggcggtaggtgttgctccgaccccttcaaccagccagagc
ctgacccctcagcctgtgattcgcccagtagttccagtcacctgtcctggacccagttct
ctcatcataccaaacaaacttaccaacactcccaaggccacaacccccagcatcacacct
gaggtcctggagaacgtgaagaagtgtaagaacttcttggtgacgttgatcaagctggcc
tctagtggaacccactcttttgacatggcaaaaaatgtcagagagcttgtcaagagcctg
ctggatgggagacttgagcctgaggagtttactgaccagctgtaccgggagctcaagtcc
tctcctcagccatacctggtgcctttcctcaagaaaagtcttccagttttgaggcagctc
acacccaacccacagctcttcatccaggaggtctaccaatccaaggcttctggccgcacc
cctgccctcctttccaccaatgccaggcctgcccacctcaacactgccagtggccaacca
atgaagtctactgctctggtgattcagcagcctggaggtgtggtgtgtaaacctactgtg
acatcttctggcccagcccgtacatacgtgtctgttcagaaccggagcctagccaaaccg
atggtcctacagtcaggacagcaccagaacacagttccattaggtgctgttgtcagacgg
actcctttccaggtcccaccccctccagcccagagacacctgttcaaggaaagtgttagt
tccttcagagaggaggatgacataaacgacgtcgcctccatggctggggtcaacctgacg
gaggagaatgcccgtatcctagcaaccaactctgaactagtgggttctgtggtgcagtcc
tgttgtgatgaacccttcctggccccaggcccacttcatacatgcatcctccataccggt
aaggcattgggaatgtccgaagttgggtcagatgtggtcaatctggtgtctcaggccacc
caggagcgactccgagacctgcttgagaaagtcactgtcgtggctcggcatcgccagcta
gccctaaaggaggacttccgtcacgttcagatcagtgatgttcgttcccagctccgcttc
ctggaagagctggagcgtctagagaaacagagaagagacaatgatgagagggaggcactg
ctccgcatcgccaggagtcgttgtaatgctgaggaccccgatcagcagctgctgaaacaa
cgtgccagagagttacagcagttggaacaagctcagttagagcacagagaagccaacctc
accgcccttgctgccatcggaccgcgcaggaaaagacccctggactcagctggaagtcag
gtggttcctggtggtaccgtgcctgtaccgcgggtttcgtttcagcgggtgacccgggtc
tctctgagggaccttctgttctgcctggagcaagaccctcctctgcgacactctctggtg
ctctacaaggccctgcttagttaa
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