Esox lucius (northern pike): 105011908
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Entry
105011908 CDS
T04894
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C isoform X3
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
els
Esox lucius (northern pike)
Pathway
els04136
Autophagy - other
els04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105011908 (atg4c)
04136 Autophagy - other
105011908 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
els01002
]
105011908 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105011908 (atg4c)
03029 Mitochondrial biogenesis [BR:
els03029
]
105011908 (atg4c)
Peptidases and inhibitors [BR:
els01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
105011908 (atg4c)
Membrane trafficking [BR:
els04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
105011908 (atg4c)
Mitochondrial biogenesis [BR:
els03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105011908 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
105011908
NCBI-ProteinID:
XP_010870676
UniProt:
A0AAY5KA47
LinkDB
All DBs
Position
LG08:complement(29269437..29281931)
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AA seq
465 aa
AA seq
DB search
MENKGTDEVEKLKTKFLSAWHNVKYSWALKSKTYFSRNSPVFLLGKCYHFKAEDEHSSTE
SSSTEACAASPATGGGVEAFRRDFASRLWLTYREEFPALPGSSLTSDCGWGCMLRAGQMM
LAQALVLHFLGRDWTWSESLSLQPLDTETWTTTAAKRLVASLEASLQGERPSDPGPPLHA
LGAHGGAEEADTHLREVYHRTLVSWLGDTPQAQLGVHRLVELGLASGKQAGDWYGPAVVA
HILRKAVEKATDPGLAGITSYVSQDCTVYSADVMDSHRSWLAGDADAPPLSDTRAVIILV
PVRLGGEKINPEYFNFVKGILSLEYCIGIIGGKPKQACYFVGFQDDSLIYMDPHYCQSFV
DVSTSHFPLQSYHCPSPKKMPFSKMDPSCTIGFYSRNVQDYERISQELSKVLQPSAKEKY
PAFTFMQGHRRDYNLSAALTPEKREWPFIRDPRTTAATSGDFVLL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaggggactgatgaggtggagaagttgaagacaaagttcttgtcagcatgg
cacaatgtgaagtacagttgggcgttgaagtcaaaaacctacttcagtcgaaattccccg
gtgttcctcctgggaaaatgctatcattttaaagctgaagatgagcatagctccacagag
agcagcagcaccgaggcctgtgctgcgtcccctgccacgggagggggcgtagaggccttc
cggagggactttgcttcccgtctgtggctgacctacagggaggagttccctgcgctgccc
ggttcctccctgacctctgactgtggctggggctgtatgctgagggcgggacagatgatg
ctggctcaggccctcgtattgcatttcctgggcagagactggacgtggtcggagtctttg
agccttcagcccttggacacagagacttggaccaccactgcagccaagcgcctggtggcc
agcctggaggcgtcactgcagggggagaggccttcagacccagggccgccactccacgcc
ctgggggctcacgggggcgcagaggaggccgacacgcaccttagggaggtctaccaccgc
actctggtgtcatggctaggggacaccccccaggctcagctgggggtccacaggttggtg
gagctgggcctggcgtcggggaaacaggcaggggactggtatggccctgccgtggtggca
cacatcctcagaaaagctgtagagaaggcaacagacccagggctggcaggaataacctct
tatgtctcccaggactgtacagtgtacagtgctgatgtcatggacagccaccggtcgtgg
ttggctggggacgcggatgccccgcccctttcggacacccgggcggtcatcatcctggtg
ccggtccgtctggggggagagaagatcaacccggagtatttcaacttcgtcaagggcata
ctgagtctggagtactgcatcggcatcatcggaggaaagcccaaacaggcctgctacttt
gtgggcttccaagatgacagcttgatttacatggatcctcattactgtcagtcttttgtg
gatgtcagcactagccatttccctctgcagtcatatcattgcccatcaccaaagaagatg
cctttcagtaaaatggacccaagctgtaccataggcttctactctagaaatgtccaggat
tacgaacgaatcagtcaagaattgtccaaggtgctgcagccgtcagcgaaggagaaatac
cccgcattcactttcatgcaaggtcaccgaagagattacaacctttcagctgccctgacc
ccggagaagagggaatggcccttcatccgtgacccgcggacaacggccgccacctcggga
gactttgtgctgctctga
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