Esox lucius (northern pike): 105012135
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Entry
105012135 CDS
T04894
Symbol
atg4d
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
els
Esox lucius (northern pike)
Pathway
els04136
Autophagy - other
els04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105012135 (atg4d)
04136 Autophagy - other
105012135 (atg4d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
els01002
]
105012135 (atg4d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105012135 (atg4d)
03029 Mitochondrial biogenesis [BR:
els03029
]
105012135 (atg4d)
Peptidases and inhibitors [BR:
els01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
105012135 (atg4d)
Membrane trafficking [BR:
els04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
105012135 (atg4d)
Mitochondrial biogenesis [BR:
els03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105012135 (atg4d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
105012135
NCBI-ProteinID:
XP_010871080
UniProt:
A0A3P9AMU9
LinkDB
All DBs
Position
LG09:11294470..11304591
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AA seq
527 aa
AA seq
DB search
MNSVSPSAAQYVGGVVASVVGQDNTLQGKVIRGPMQASPVDPGGGGSFGNQQGPHLGGVR
AMDANTAGEPDEVDKLKAKLMSAWNNVKYGWSVKSKTTFNKNSPVTVMGHSYVLNCEDEV
ERFRLAFVSRLWLTYRREFPQLEGSAWTTDCGWGCMLRSGQMLLAQGLLVHLLPRDWSWP
SAQEFADVDFEALRPRSPSRAGGVPIPSFGYSSSPRTPTMPQKTPMPGDTALKRGQKTRP
EAGRHSQSEPLHRRLVAWFGDVPPAPFGLHQLVELGRSSGKKAGDWYGPSVVAHILQKAV
AQTSEVQNLVVYVAQDCTVYKGDVVCLCDQSLTRGMSVPEPSGSDWTSVIILVPVRLGGE
SLNPSYIQCVKNILRLKCCIGIIGGKPKHSLFFIGCQDDQLLYLDPHYCQAVVDVTQGNF
PLESFHCSSPRKMPFSRMDPSCTIGFYARTKKDFETLCGDVSEALSSSKEKYPIFTFVEG
QGPDYGLASQSSSHLHSDTSPSPAHILPTGKLNKSNNRGSLDEFVFL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtctcccagtgcagctcagtatgtggggggagtcgtggcgagcgtagtg
ggtcaggacaacacgctccagggaaaggtgatccgggggcccatgcaggcctcgccagta
gaccctggcgggggaggtagcttcgggaaccagcagggtcctcaccttggtggagttaga
gccatggacgccaacacggctggtgaaccagatgaggtggacaaactcaaggccaagctg
atgtcggcttggaataatgtcaaatatggctggtcggtcaaatcgaaaaccacattcaac
aagaactctcctgtcactgttatgggccattcctatgtgcttaattgcgaagatgaggtg
gagcggttcaggctagcatttgtgtcccggctgtggctgacctaccgccgggagttcccc
cagctggagggctctgcgtggaccactgactgcggctggggctgcatgctgcgcagcgga
cagatgcttctggcccagggcctcctggtgcacctgctgccccgagactggtcgtggccg
agcgcccaggagtttgccgacgtggacttcgaagctctgagaccccgctccccatcccgc
gctgggggtgtgcccatcccctcgttcggctactcctcctccccgcgtacccccacgatg
ccccagaagaccccaatgcctggggacactgctctcaaacggggccagaagaccaggcca
gaggcaggcaggcacagccagtctgagccgctccaccggaggctcgtagcctggtttggg
gacgttcctccggccccgttcggactgcaccagctggtggagttgggaaggagctccggg
aagaaggcaggggactggtatggcccctcagtggtggcccacatactccaaaaagcagtg
gcccaaacgtctgaggttcagaaccttgttgtgtatgtggcccaggactgtactgtgtac
aaaggggatgtggtgtgtctatgtgaccagtcgttgacccgcggaatgtccgtaccggag
cccagcgggtcagactggacgtctgtcatcatcctggtacctgtcagactaggtggagag
tctctcaacccatcctacatccagtgtgtcaagaacattctcaggttaaaatgctgtatc
ggaatcatcggaggcaaacccaagcattcactgttctttattggctgccaagatgaccag
ctgctgtatctggaccctcactactgtcaggcggtggtggatgtaactcaaggcaacttc
cccctggagtcattccactgtagctccccgagaaaaatgcctttcagtcggatggacccc
agctgtacaattggcttctacgccaggaccaagaaggactttgagactctgtgtggcgat
gtcagtgaggcactgtcatcttccaaagagaagtatccaatctttacctttgtggagggt
caggggccagattatggattggcctctcaaagctcctcccacctacactctgatacctcc
cccagccccgcccacatcctgcccacaggcaagctgaacaagagcaataatcgaggcagc
ttggatgaatttgtcttcctgtga
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