Esox lucius (northern pike): 105012299
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Entry
105012299 CDS
T04894
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105012299
Membrane trafficking [BR:
els04131
]
Protein recycling
Others
Others
105012299
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
105012299
NCBI-ProteinID:
XP_012990787
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Position
LG09:complement(14619217..14764675)
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AA seq
1284 aa
AA seq
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MERGVRFWHTSAFWFLLLIVLSFFLAAKSEITCRSCQPWDKRLTKELLFKTDARELATGY
GGEVMGNGEGAPALARLNSASAETRQLDCAAGSAECIRGKYVYPRRKRNTDMIINFKKTL
GRGLLYGGGRRREFTPRVEDKVSKLKMYRDSGKTGVDKARTDLVPAVPHKQRVRKNSSVA
NVLDDKVKSSGSPQRRETLPLSNPRKGITSSAGRSRVKRSELRWSNEDRRTPTSRQDELK
LTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGTTYQK
LNEKVGAKTILSYLYVSPNNKRKIMLLTDPEVESGLLISSDEGATYQKYRLSFYILSLLF
HPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKTGLDKEPGLIHLETSIS
EGQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGRPIYYVSAKRNVF
TPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSDTGGVFYTLALENVVSSM
GPEGNVMIDLYEVAGIKGMFLANKKMDNMVKTYITYNRGRDWRLLQAPTADLRGNGVHCE
LPYCSLHLHLHVSANPYTSGNIESKDSAPGIIVASGSIGAELTTSNVSMFITSDAGNTWR
QIFEEEYSVLYLDQGGALVAIRHTPLPIRHLWMSFDEGRQWNKYSFTTSPLFVDGLLGEP
GEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEGDYQTWHLHNQGEPCIMGVKRIYR
KLKPIARCVMGKTYSVTMTSAPCDCTEADFECDYGYERRSDGKCTPAFWFLPSSMSRSCT
TGTTFLNSTGYRKVVSNNCTAGVIAEYTARRQHCPTQAPKGLHLVTSEGKLTATLGTNVT
FLVFLEEGDGARTSIMVDFGDGHALTYSNISSIEDGIRHVYKAVGIYRVTATGENSLGSE
SVVLYLHVACQLEYIHLSAPFVAVKNKEVNLTAVLWPSQVGTVTYIWWFGNNTEPIITLE
GSVACTFSREGVNTVTVQVSAGNAILQDRKTIAVHEYFRSHLLAFSSNLDDHNPDVAEWR
LDVSRVIKNAMVHASGVRQEQLLVTVLPGLPTAAEFFLLPDKDITEGKPEKISAHLDELS
ETLLNALNQNLVQFTLRPGVQVTVYTAHLSAAPLVDTSENHSGSAMLMLLSVVVLGLAIF
VVYKFKRKIPGLNVYAQMQNEKEQEMIQSPGSPAESTLVSPNPPRELVTSPKLLDTELNT
RPIGCIKPHAHVKFSTELPTYINV
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggggtcagattctggcacactagcgcattttggtttctgcttttgatcgtt
ctatcattctttctcgccgctaaatcagagataacttgcagatcatgtcagccgtgggat
aagaggcttactaaggaattactgtttaaaacggacgctcgagaattagcaacagggtac
ggaggtgaagttatgggaaatggagagggggcacctgcactagcgaggttgaattctgca
agtgccgaaactcgacagcttgattgcgcagctgggtccgctgaatgcatccgggggaaa
tacgtctacccaaggcgaaaacggaatactgacatgatcatcaatttcaagaagacactc
ggtcgaggtttgctctacggtggtggtaggcgtagagaattcaccccgcgcgtcgaggac
aaagtttccaaactgaaaatgtaccgcgattcaggcaagactggtgtggataaggctaga
acagatttagttcccgcggtaccacacaagcaacgagttcgtaagaacagctcggtagct
aatgttttggatgataaagtgaagtcttccggctcccctcagagaagggagacgctgcct
ctgagtaacccgagaaagggcatcacctcatcggctggacggagcagagtaaaacggtcc
gaattgcgatggagcaacgaggacaggagaacgcctacttcgaggcaggacgaactcaaa
ctcaccagttcaaccttcgcattgaccggagattccgctcacaaccaagccatggtgcac
tggtctgggcaaaatagcagtgtgatcctcatgctgaccaagctgtttgacttcaatctg
aacagcgtcacagagagctcattgtggaggtcaaccgactatggaaccacctaccagaag
cttaacgagaaagtgggtgcaaaaaccatcctcagctacctctatgtcagtcccaacaat
aagagaaagatcatgctcctgaccgacccggaggtggagagcggcctgctcatcagctcg
gatgaaggagccacctatcagaagtaccgcctcagcttctacatcctcagcctgctgttt
caccccgagcaggaggactggatcctcgcttacagccacgaccagaagctgtacagctcg
gtggagttcgggcggaggtggcagctcgtccatgagagggtggcccctaaccgattttac
tggtcgaaaacgggtttagacaaagaaccgggcttaattcacctggaaaccagcatctca
gaagggcaggcgttgtacgtcacctgcaagctgcagaattgcactgacgccaataagggc
aagccgttcccaggctacattgaccccaattccctggtggttcaagacgagtatgtattt
gtccaggtgtctacgggaggacgtccgatctattatgtgtccgcaaagcggaatgtcttt
acgcccatgaagctacccaagtacaccctgccgaaggacctgcatgtaatcagtaccgac
gagaaccgggtggtggccgcggtccaggagtggaaccagaatgacacctacaacctgtac
gtgtccgatacgggaggagtgttctacaccctggccctggagaacgtggtcagtagcatg
ggacctgaaggcaacgtcatgatcgacctgtacgaggtggccggcataaaggggatgttc
ctggccaacaagaagatggacaacatggttaagacctacatcacttacaacagagggaga
gactggcggctcctgcaagctcccactgctgacctgaggggcaacggcgtccattgtgaa
ctaccgtactgttcccttcacctccacctccacgtgtcggccaatccctacacgtctggg
aatatcgagagcaaggactccgcgccggggatcatagttgcctcaggctccattggagcg
gagttgaccaccagcaacgtgagcatgttcatcacctcagacgctggcaacacctggaga
cagatcttcgaggaggagtacagtgttctgtacctggaccaaggaggagccctggtggcc
atcagacacactccactccccatccgacacttatggatgagttttgacgagggccggcag
tggaacaagtacagttttaccacgtcgccgctgtttgtggacgggctgctgggcgagcca
ggagaggagactttaatcatgacgatctttggtcacgtcagtcaccggtccgagtggcaa
ttggtcaaaatagatttcaggtccatcttcaacaggagatgtactgagggggactaccag
acatggcacctacacaaccagggcgagccgtgcatcatgggagtgaagagaatctacagg
aagttgaagcccatagccaggtgcgttatgggtaagacgtactcggtcacaatgacctct
gcaccttgcgactgcacggaggccgactttgaatgtgactatggctacgagaggcgtagt
gacggaaagtgcacccccgccttttggttcctcccgtcgtctatgtccaggagctgcacc
accgggacgaccttcctcaacagcaccggttacaggaaggtggtgtccaataactgcacg
gcgggagtgatagcagagtacacagccaggagacagcactgccccacccaggcccccaaa
ggcctccacctcgtcaccagcgaggggaagctcaccgccacgctgggcaccaacgtcacc
ttcctggtgtttctagaggagggggacggagccaggacgagcatcatggtggacttcggg
gacggccacgcgctgacgtactccaacatcagctccatcgaggacggcatccggcatgtc
tacaaggcggtggggatttaccgtgtcacggccaccggagagaacagcctgggctctgag
agcgtggtgctctacctccacgtcgcgtgtcagctggagtacatccatctctcggctccc
tttgtggcggtgaagaacaaggaagtcaacctgactgctgtgctgtggcccagccaagta
ggaacggtcacctacatctggtggtttggaaacaacactgagccgataatcaccctggaa
gggagcgtggcgtgcacgttctctcgggaaggtgtcaacactgtcaccgtacaggtgtcc
gctgggaacgcaatcctgcaggaccggaaaaccatcgccgtccatgaatattttaggtcg
catctcttagccttctcatccaatttggatgatcacaacccagatgttgcagagtggaga
ctggacgtcagcagagtcattaagaatgccatggtccatgcctcaggggtgcgccaagag
cagctcctagtcactgtcctcccggggttgcccacggcagcagagttcttcctcctgccc
gacaaagacataacggaagggaagcctgagaagatctcggctcacctagacgagctctct
gaaacacttctaaacgccctcaaccaaaacctggtccagttcacccttcggccgggcgtc
caggtcacggtgtacactgcgcatttatcggccgcgcccctagtggacaccagtgagaac
cacagcggctctgccatgctaatgctgctgtcggtagtggttctgggtttggcgatattt
gtcgtctacaaattcaaaaggaagatcccaggcctcaacgtctatgcgcagatgcagaac
gaaaaagaacaagaaatgatccagagtccaggaagtccagcagaaagcactctggtgtcc
ccgaaccctccgagggagctggtgacttctccaaagcttctggacacggagttgaacacg
cggcccataggatgtatcaaacctcacgcacatgtcaagttctcaactgagctcccaacg
tacatcaacgtttaa
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