Esox lucius (northern pike): 105012300
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Entry
105012300 CDS
T04894
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105012300
Membrane trafficking [BR:
els04131
]
Endocytosis
Others
Others
105012300
Endosome - Lysosome transport
105012300
Endosome - Golgi transport
105012300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
105012300
NCBI-ProteinID:
XP_010871327
UniProt:
A0A6Q2ZBI3
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Position
LG09:14338137..14554548
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AA seq
1252 aa
AA seq
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METWAGFCPGLRLTLCTWLLISAHTQLNAKAKITCASCPSPVQLYLEELQLDTGTRAAAG
PSQASKALKQVQLEYQLLGEYKQNTGVLSDRLQAGIFEDGLRFSNDGVTSKVAQEDSDGP
MERGETYRGEYNAGVYNLQHLEAEDAALRRMKRSGPKHPEFSESMRTGGPGFERETSDEI
RSPGPLLDGQRLGRSEFKWTRDEGRGTSRDDPKLTSTTFALTGDSAHNHAVVYWSGQNSS
VILILTKLYDFHLGSVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPSNKRKIMLL
TDPEFERSVLISSDEGANYQKYRLSFYILSLLFHPTQEDWALAYSHDQKLYVSLDFGRKW
QLVHEHVNRFYWSITGLDKDSDLVHMEAHTPDGRVQYVTCRALSCSEPNRNYPFPGYIDI
SSLVVQDDYMFIQVTTAGRASYYVSYKREPFLQIKLPKYSLPKDLHIVSTDEHQVFAAVQ
EWNQNDTYNLYLSDTRGIFFTLALENVKTTRGLGGNQMLDLYEVAGIKGMLIANKRLDNQ
VKTYITYNKGRDWRLLQAPGSDLAGNDIHCILPFCSLHLQLQTSENPYLSGSISTKASAP
GIIVATGNIGSELSYNNVGMFISSDAGNNWRQIFEEEHNIWFLDKGGALVAVKQPTIPTR
HLQISFDEGRQWTRHSFSLVPLFVDGMLVEAGTENQIMTFFGHFSHRSEWQLIKIDYKSI
FNRKCTEGDYQTWHLHNKGEPCVMGQKQIYMKRRPGNYCMLGKDYAKVLSAESCICRAHD
FECDYGYERRADGNCLPAFWYNPSAMSRNCSQGQDYLNSTGYRKVVSNNCTNGVKEMYTP
RKQLCPNRAPRGLSLATREGKLTTNLATNVTFLIHLDEGDSMRTNIQLDFGDGTAVSYSN
LSWIEEGIRHVYRTAGIFRVSALAENTLGSDSAALYLHVTCPVEHVQLLAPFVAIKNKEV
NLTAVVWPNHSRTLTYFWWLGNSTEPVISIDGSISYTFTREGMNTVTVQVSSANTILQDT
KTIAVQEFFKSLLLSFSPNLDEYNPDIPEWRQDVGRVIKKALLQVSEFPEDQLLVAVFPG
VPTAAELFLLPHKNQSEDRKKSEEELEQISEILASALNQNLVDFELKPGARVIVYVTQLT
LAPLVDSIPRHSSSAMLMLLSIVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSV
SQSDSTPKITLSEFPTPKELMEKELDARVKRKIGGIGNACEITREIPNCTSV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggagacttgggctggcttctgcccaggcttgcgcttaactctgtgtacctggcttctg
atctctgctcatacccagctaaatgccaaggctaagataacttgtgcgtcgtgcccgtcg
cccgtccagctatacctggaggaattacaactggataccggtacgcgcgcggctgctggc
cctagccaggcgtccaaagctttgaaacaggtccagctggagtaccagctactcggagaa
tataaacaaaatactggagtactaagcgaccggctacaggcaggtattttcgaagatggg
ttaaggttcagtaacgatggagttacctcaaaagtcgcacaggaagattctgacgggccc
atggaaagaggagaaacttaccgtggtgaatataatgctggggtttataatttgcaacac
ctcgaggctgaggatgcggcgctgcggaggatgaagcgaagcggtcccaaacaccccgaa
tttagtgagagcatgaggactggtggccccggttttgagagagagacctcggatgagata
aggagtccaggtccgttattggacggacaaagactgggccgatctgaattcaagtggacc
agggatgagggaagagggacttccagagatgatcctaaactaaccagcactactttcgcc
ctgaccggggactccgctcataaccacgcagtggtgtattggtcgggacaaaacagcagc
gtgatcctgattctgaccaaactctacgactttcacctgggcagtgtaacagagagcacg
ctttggagatcaacagactatggatcaacttacgagaggatgaatgacaaagtgggatct
aagacagttctgagctacctgtatgtctgtccatccaacaagagaaagataatgttactg
accgaccctgagtttgagagaagtgtgctcatcagctcggatgaaggagccaactatcag
aagtaccgcctcagcttctacatactcagcctgctgtttcatccaacacaggaggattgg
gccctagcctacagccacgaccagaagttgtatgtctccctcgactttgggcgaaaatgg
cagctcgttcacgagcatgtgaacaggttctactggtctataacaggtctagacaaggat
tcagatctggttcacatggaagcacacacccctgacggacgagtacagtatgttacatgt
cgggctttatcatgctcagagcccaacaggaactacccattccctgggtacattgacatc
agctcgctggtggtccaagatgactatatgttcattcaggttacgacagcgggacgggcc
agctactatgtgtcctacaagagagaaccattcctccaaattaaactgcccaaatactcc
ttacctaaggacctccacatcgtgagcaccgatgagcaccaggtctttgcggcagtccaa
gagtggaaccagaacgacacctacaacctgtacctctctgatacccggggcatcttcttc
acccttgccttggaaaacgtcaagaccacccgcggcctgggtggcaaccagatgctcgac
ctgtacgaggtagcaggtatcaaaggcatgttgattgctaacaaaaggctggataaccag
gtcaagacttacatcacctacaacaagggccgtgattggaggctactgcaggcaccgggg
tcggacctggctggaaatgatattcactgtatactgcccttctgttcgctccatctccag
ctgcagacatcagaaaacccgtatctgtcaggcagcatatcaaccaaggcttcagcaccc
ggaattatagtggccacagggaatattggatctgagctctcatacaataatgttggaatg
ttcatctcatctgacgctggtaacaactggagacagatattcgaggaggagcacaacatc
tggtttctggataaaggaggggccctagtcgctgtgaaacaaccaacaattcctacccga
catttacagatcagtttcgatgaggggcggcagtggaccagacacagcttctccctggtg
cctctgttcgtagatgggatgctggtggaagccgggacggaaaaccagatcatgacgttt
ttcgggcactttagtcatcggtccgagtggcagcttatcaagatagactacaagtccatc
ttcaacagaaaatgtacagaaggagactatcaaacctggcaccttcacaacaagggcgaa
ccatgtgtaatgggccagaagcagatctatatgaagcgtcgacctggcaactattgcatg
ctgggaaaagactacgccaaagtcctctctgctgagtcatgtatctgtcgggcccatgac
tttgaatgcgattacggctatgagcgtcgcgcagacggaaactgtctaccagctttctgg
tacaacccatccgccatgtcgcgaaactgcagccaaggacaggactacctcaacagtaca
gggtaccgtaaagtggtgtccaacaactgcaccaatggggtcaaggagatgtacacaccc
aggaagcagctgtgtcccaacagggctccgagaggcctgtctctggccacccgagagggc
aagctcaccaccaacctggccacgaacgtcaccttcctcattcatctggacgagggagac
tcaatgagaaccaacatccagctggatttcggtgacggcacagcggtctcctactccaac
ctcagctggatcgaggaaggcataagacacgtgtacaggacggccgggatattccgcgtg
tccgccttggcagagaacaccctgggatcggacagcgccgccttatatctccacgttacg
tgtcctgtggaacatgtccagcttctggctccctttgtggccatcaagaacaaggaagtt
aacctgacggcagtggtctggcccaaccactccaggaccctgacctacttctggtggctg
ggaaacagcactgagccggtgatcagcatagacgggagtatctcatacaccttcaccaga
gagggaatgaacactgttacagtccaagtgtcatcagccaacaccatactgcaagacacc
aagacaatagcagtacaagagttcttcaaatcgctgcttttatctttctcccctaatctg
gacgagtacaaccctgacatccctgagtggagacaggatgtgggtagagtcattaagaag
gctctgctccaagtgtcagaatttccagaggatcagctattggttgccgtgttcccagga
gtgccaacagctgctgagctttttctgttaccacacaagaaccaatcagaggacaggaaa
aaaagtgaggaggagctggagcagatctcagagattcttgccagcgctctgaaccagaat
ctggtagattttgagttaaagccaggagccagagtaattgtttacgtcacacagctaact
ttggctcctctggtggattcgatccccagacacagtagttcagccatgttgatgctcctg
tccatcgtattcctgggtctggctgtgtttctcatctacaaattcaagagaaaaatcccc
tggattaacatatacgcagaggtgaaccaggagaaagagcaggagatgatcggttcggtc
agccaaagtgacagcacgcctaagattaccctcagtgaattccccacacccaaagaactg
atggagaaggagctggacgccagggttaaacgtaagatagggggaattggaaatgcctgc
gagatcacaagggagattcctaactgtactagcgtgtga
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