Esox lucius (northern pike): 105012333
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Entry
105012333 CDS
T04894
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
els
Esox lucius (northern pike)
Pathway
els00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105012333 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
els01007
]
105012333 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
els03016
]
105012333 (vars2)
Enzymes [BR:
els01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
105012333 (vars2)
Amino acid related enzymes [BR:
els01007
]
Aminoacyl-tRNA synthetase
Class I (U)
105012333 (vars2)
Transfer RNA biogenesis [BR:
els03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105012333 (vars2)
Prokaryotic type
105012333 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
105012333
NCBI-ProteinID:
XP_010871392
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All DBs
Position
LG10:3273794..3291258
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AA seq
1092 aa
AA seq
DB search
MWRTARGLPVRVAERGVQRVWETWTCSYTSSKPSSQSAPTLRTRAEKERRRKEKEEAILG
SQHNGPEDQGMKWSDKERIAYSASTPPGKKKDTTLPFPSSYSPEYVEASWYQWWEKQGFF
TPENHDNLPGAVNRSFSMCIPPPNVTGTLHLGHALTVAIEDALARRRRMQGYKVLWVPGC
DHAGIATQTVVERMLFREHGKRRKDLSREEFLQEVWKWKKSKGDEIYHQLRKLGASLDWS
RACFTMDLGFSSAVTEAFVRMCDSGLIYRSERLVNWSCALESAVSEIEVDSKQLSGKTLL
SVPGYQKKVEFGTMFTFAYPLDGQDGEVTVSTTRPETMLGDVAIAVHPEDPRYQAVHGKH
CRHPFTDRLIPIITDATVDVELGTGAVKVTPAHDHTDFLLSQRHGLPCLTVIGGDGAMTP
LCGQWLEGVRRFDAREHVIDALREKKLFRGKEDHAMSLPLCSRSGDVIEPLLKKQWFVHC
EEMAQRAIQAVDEGQLEIIPHFYTKTWKSWLSNISDWCISRQLWWGHQIPAYRVSLPGSA
NTEEELWVWGRSQAEARERAAVKYEVTPDSVTLTQDPDVLDTWFSSGLFPFAMLGWPQQT
SDLRQFYPNTILETGSDLIFFWVARMVMLGTELTGQLPFKQVLLHSLVRDKHGRKMSKSL
GNVIDPLDVISGISLERLQEKVKEGNLDPRESVVAMEAQSKDFPKGIPECGTDALRFALC
SYKAQGEDISLSVSQVLSCRHFCNKMWQTVRFTLGVLKDRGAELLPLEQTAPLSGIDRWV
CSRLYSTVLQCEQGFDRYELHSVTAALHSFWLHSLCDIYLECIKPALTQQAGGGVASGQV
NAADSGVGHGEARVSGSVLFHCVTVSLALLSPFMPFLTEELWQRLRPLSGQGEDGVTTSL
CLQSYPQSAHLAHWHFLQEEADFSLVQEVVRVARSLRAQSGVTKERPDMWAVCSVSQAQT
LVRFGPAIQTLARISTLHLHCPHEAGGDCSLFSPSAPPKGSAVGVVDHSCQLHLRVQGEV
VLNKRGLQLSQRKEKLLCKLEQSLSRTRVPEYSETVPEWVRLRTEKKISALQHELRNIEE
QLTALQGPRQDN
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggacagctcgtggtctccctgtacgggtagcagaaagaggggtacagagggtg
tgggaaacatggacctgttcttacacttcgtcaaaaccctcttctcaatcagctcccact
cttcggactcgggctgagaaagagaggcgaaggaaagagaaggaagaggccatacttggc
agtcaacacaatggtcctgaagatcaaggaatgaaatggagtgataaggagagaatagca
tacagtgcctcaactcctccgggcaagaagaaagacaccacgctgccctttccttcctcc
tacagcccagagtatgtggaggccagctggtaccagtggtgggagaaacaagggttcttc
accccggagaaccacgacaatctaccgggagctgtgaatcggtctttctccatgtgtatc
cctccacctaatgtgactggcacgcttcaccttggtcatgctctcacagtggccatagag
gatgcgttggctcgccggaggaggatgcagggttacaaagtgctctgggtaccaggctgt
gatcatgctggtattgccacacagacggtggtggagaggatgttgttccgggaacacggg
aagagaagaaaagatctcagcagggaggagtttctacaggaagtgtggaagtggaagaag
agtaaaggagatgagatctaccatcagctgaggaaacttggtgcgtctctggactggagc
agagcctgtttcaccatggatctgggtttcagcagtgctgtgacggaggcctttgtcagg
atgtgtgattctggtctgatctatcgctcggagaggcttgtgaattggagctgtgctctg
gagtctgcagtctctgaaatagaggttgactctaagcagctatcaggaaagacactgctg
tcagttcctggttaccaaaagaaggtggagtttgggaccatgtttacctttgcttatcct
ttagacggtcaggatggggaggtgacagtgtccaccactcgtcccgagaccatgctggga
gatgtggccatcgctgtacatccagaggacccgcgttatcaggcagttcatggtaaacac
tgccgacaccccttcaccgaccgactcatacccatcatcacagatgcgacggtggacgtg
gagctgggtacaggggctgtaaaggtcactccagctcacgaccacactgacttcctgctt
tcccagagacacggtcttccttgccttactgtgattggaggagatggcgccatgacccca
ctctgtggccaatggctggagggagtgaggcgctttgacgccagagaacatgtgatcgat
gcacttcgagagaagaagctcttcagagggaaggaggatcatgccatgtctttacccctc
tgcagccgctctggggatgttattgagcctttgttgaagaagcagtggtttgtgcattgt
gaagagatggcccagagagccatacaggcagtggatgagggacagttagaaataatccca
cacttttataccaaaacctggaagagctggctctctaatatcagtgactggtgcatttcc
aggcagctttggtggggtcaccagattccggcctatcgagtgtctcttcctggttcagca
aacacagaggaggaactttgggtctgggggcggagccaggcggaggccagggaacgcgcc
gctgtgaagtacgaagtgacacctgactccgttactctgactcaggaccctgacgttttg
gacacctggttttcctctgggctcttccctttcgccatgttgggctggccacaacagacg
agtgacctgaggcagttctacccaaacaccatactggagacaggaagtgatctcattttc
ttctgggtagccaggatggtaatgctgggaacagagttgactggacagctgcccttcaag
caggtgctcctccattctctggtgagggataagcatggcaggaagatgagtaaatctctg
ggaaatgtcatcgaccctttagatgtcatctctggcatctctctagagaggctccaagaa
aaagtgaaagagggtaatcttgaccctcgtgagagcgtggttgccatggaagcacagagt
aaggacttccctaaggggattccagagtgtggaaccgatgcgctccgctttgccctctgc
tcatacaaggcccagggtgaggacatcagcctgtctgtgtcccaggtcctgagctgcaga
cacttctgtaacaagatgtggcagacggttcggttcaccctgggtgtgctgaaggacagg
ggggcggagctactgccattggaacagactgctcctctgagcggtatagaccggtgggtg
tgttctaggctgtacagcacggttctccagtgtgagcagggctttgaccgctatgagctc
cactccgtcacggctgccctccactcattctggctccacagcctctgtgacatctacctg
gagtgtatcaagccggcgctgacccagcaggccggtggaggcgtggcgtcgggccaggtc
aacgcggcggacagcggggtcggtcacggagaggcccgggtgtctggcagtgtgctcttc
cactgtgtgaccgtctccctggcgctgctctcgcccttcatgccattcctcaccgaggag
ctgtggcagaggctccgccccctcagcggccagggagaggatggggtcacgaccagcctg
tgtctgcagtcttacccacagtcggcacacctggcacactggcacttcctccaggaggaa
gcagacttctctctggtccaggaagtggtgagggtagccaggtctctcagggcccagagt
ggtgtgaccaaagaaaggcctgacatgtgggctgtttgttcggtcagccaagctcagact
ctcgtccgctttggccctgccattcagaccctggccaggatctctaccttgcacctccac
tgcccccatgaggccgggggagactgctccctcttctccccctctgctccacccaaaggc
agtgctgtgggtgtggtcgaccactcctgtcagttacacctccgggtgcagggtgaagtg
gtgttgaacaaacgtggtctgcagctttcccagcgcaaagagaagcttctctgtaagctt
gaacagtcgctgtctcgaacccgggtgccagagtactccgaaacggttccagagtgggtg
aggctacggactgaaaagaagatctcagccttgcagcacgagctgagaaacattgaggag
caactgacagcactacaaggaccaagacaagacaactga
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