KEGG   Esox lucius (northern pike): 105012361
Entry
105012361         CDS       T04894                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
els  Esox lucius (northern pike)
Pathway
els03082  ATP-dependent chromatin remodeling
els03083  Polycomb repressive complex
els04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105012361
   03083 Polycomb repressive complex
    105012361
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    105012361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:els03036]
    105012361
Chromosome and associated proteins [BR:els03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     105012361
  Histone modification proteins
   HAT complexes
    HATB complex
     105012361
   HDAC complexes
    Sin3A-HDAC complex
     105012361
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     105012361
    PRC2.2
     105012361
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     105012361
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105012361
  Chromatin remodeling factors
   NuRD complex
    105012361
   NuRF complex
    105012361
   NuRF complex (fruit fly)
    105012361
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 105012361
NCBI-ProteinID: XP_012990905
UniProt: A0A3P9A9U0
LinkDB
Position
LG10:2660543..2666947
AA seq 424 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICMWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEAGTDP
EVTA
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggccgataaagaagcagcctttgatgacgcagtggaggagcgggtcataaatgaggag
tataagatctggaagaagaacacccccttcctctacgacctggtgatgacccacgccctg
gagtggcccagtctcacggcccagtggctgccggatgtctccaggcccgaggggaaggat
ttcagtgtgcaccgcctggttctggggacacatacgtcagacgagcagaatcacctggtt
atcgccagtgtccagctgcccaatgacgacgcgcagtttgacgcttctcattatgacagc
gagaaaggcgagtttggaggttttggatccgttagtggaaagattgaaattgagatcaag
ataaaccacgagggagaggtgaaccgggcccgctacatgccccagaacccctgcatcatc
gccaccaagacccccacatcagacgtgttggtgtttgactacaccaagcacccgtccaaa
ccagacccctcgggggagtgcacccctgacctgcgtctgaggggtcatcagaaggagggt
tacggcctgtcatggaaccccaacctctccgggtgtcttctgagcgcctccgatgaccac
accatctgcatgtgggacatcagcgccgtgccgaaggaggggaagatcgtggatgccaag
accatcttcacgggtcacacggccgtggtggaggacgtttcctggcatctactccacgag
tcgctgtttgggtccgtggctgacgaccagaaactgatgatctgggacactcgctccaac
aacacgtccaagcccagccacgcggtggacgcccacactgctgaggtcaactgcctctcg
tttaacccctacagcgagttcatcctggccactggttctgcagacaagacagtcgctctg
tgggacctgaggaacctcaagctgaagctccactcctttgaatcacacaaggatgagata
tttcaggtccagtggtccccccataacgagaccatcctggcgtccagcggtacggacaga
agactcaacgtctgggacctcagtaaaatcggagaagagcagtcgccggaggacgctgaa
gacggcccccctgagctgctgttcatccatggggggcacacagctaagatctcagacttc
tcctggaaccccaatgaaccctgggtcatctgctccgtgtccgaggacaacatcatgcaa
gtctggcagatggctgagaacatttataatgatgaggatccagaggcgggaacagacccg
gaagtcacggcctga

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