Esox lucius (northern pike): 105012523
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Entry
105012523 CDS
T04894
Symbol
pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X3
KO
K12200
programmed cell death 6-interacting protein
Organism
els
Esox lucius (northern pike)
Pathway
els03250
Viral life cycle - HIV-1
els03272
Virion - Hepatitis viruses
els04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105012523 (pdcd6ip)
03272 Virion - Hepatitis viruses
105012523 (pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105012523 (pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105012523 (pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
els04147
]
105012523 (pdcd6ip)
Membrane trafficking [BR:
els04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
105012523 (pdcd6ip)
Exosome [BR:
els04147
]
Exosomal proteins
Proteins found in most exosomes
105012523 (pdcd6ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
AAT
DUF2226
COG3_N
Motif
Other DBs
NCBI-GeneID:
105012523
NCBI-ProteinID:
XP_019905672
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All DBs
Position
LG10:complement(9539619..9553449)
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AA seq
875 aa
AA seq
DB search
MATFISVPLKKSSEVDLVKPLSKFVTATYPAGEEQGEYIRSVEELNKLRKSALGRPLDKH
ESSLEILLRYYDQLCAVEAKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNAAALASQIALEQNLDSDEGLKAAAKFYQLASGAFGHIKDTVLSALNREPTMDISP
ETVGTLSLIMLAQAQEVFFLKATSDKMKDGIIAKLANQAADFYSDAFKQCQYKENLPKEV
LPVLAAKHCIMQANAELHQSILAKQKKHFGEEIARLQHAAELVKTVASRYDEYVSVKELS
DKINRALTAAKKDNDFIYHDRVPEVKDLEHIGKAALVKATAITPPLSAKFTDLFEKMVPM
AVQQSMSTYNQRKADTVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQSIADKA
RAIVQQGGLQSIEQLIRDLPELLTRNREILDESLKMLDDEESTDSELRSKFNQRWNRTPS
GDLYKPLRAEGGNFRSVLDKAVQADQVVRERYNTHCEMIALLCKPEAELSAALPSANPAK
TLQGSEVVSVLRSHLSKLEEVKKEREGLEAEIKAVTFDMSTCFLTALAQDGAINEEALSV
SQLDQLYGSYTQRVQASLRAQEGLLGNVQASHQEFSSLKQSNSEANDREEVLKKLASAHD
SYVEITSNLKEGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKELQQSIAREPSAPS
FNVPAYQTNPTATAAGPTPAPRTVFQPEAKAPPPQRPPPPTFTPQAASAPGNPPSNQPQT
GNPPPMAPPSQAQGPPYPTYQGYPGYAYQMPMGYNPYAAYGQYNMGTPMQPFVPYQQGPV
PGQGGYPGAPPTHQSPYPYQQPAQQAPHQPYFPQP
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttcatttctgtcccgttaaagaagtcgtctgaagtagatctagtaaaaccg
ctttccaaatttgtcacggcgacatatccagcgggtgaggagcaaggtgaatatatcaga
tccgtggaggagttgaacaagctgcgcaagagtgctctggggaggccgctggacaaacac
gaaagctcactagaaatcctactgaggtactatgaccagctatgtgccgtggaagccaag
tttccgttctctgaaaaccagctgtgtctaaccttcacatggaaagatgcctttgataag
ggctcattgttcggaggctcagtcaaactagccctggccagtctgggctatgagaagacg
tgtgtgttgttcaatgcggctgctttggccagtcagatcgcgctagaacaaaacctggac
agtgatgaaggactgaaggccgcagctaaattctaccagctggccagcggagcgtttggg
cacattaaggacacagtgctgtcagccctgaatagggagcccaccatggacatctctcca
gagaccgtagggaccctcagcctcatcatgctggctcaggcacaggaggtgttcttcctc
aaggctacgtcagataagatgaaagatggcatcattgccaaactggccaatcaggcagca
gacttttacagtgacgccttcaagcagtgccagtacaaggagaacctgcccaaggaggtt
ttgccggtgctggcagccaaacactgcatcatgcaggccaatgctgaactgcaccagtcc
atccttgccaagcagaagaaacactttggggaggagattgctcgccttcagcatgcagca
gagcttgtgaagaccgtagcatctcgctacgatgagtacgtcagcgtgaaggaactgagt
gataagatcaaccgtgctctgaccgctgctaagaaggacaacgacttcatctaccacgac
cgtgtccccgaggtcaaagacctggaacacattggcaaagcagctctagtgaaagctaca
gccatcacacctccgctcagcgccaagttcactgacttgtttgagaagatggtgcccatg
gcggtacagcagagtatgagtacgtacaaccagagaaaggctgacactgtcaacagactg
gtcggaaccatgagggaagccaccaacctctgcaacggtgtcttggcgtctctgaacctg
ccggcggccctggaggacctatctggagattctatcccacaatccatcgctgataaggcc
cgtgccattgttcagcagggggggctgcagagcatagagcagctgatccgagacctgcct
gaactactgacacgcaacagagagatcctggatgagtctctgaaaatgctggatgacgag
gagtcgacagacagcgagctgaggtccaagttcaaccaacgctggaacagaactccatca
ggagatctctacaaacccttaagagcagaggggggcaacttccgcagcgtgttggacaag
gctgtgcaggccgaccaggtggtcagggagcgatacaacacacactgtgagatgatcgct
ctgctgtgtaaacctgaggcggagctctctgctgccctgccgtcagccaaccctgctaag
accctgcagggcagcgaggtggtgagtgtgttgcgttcccatctgtccaagctcgaagaa
gttaagaaagaaagggagggcctggaggcggagattaaggcggtgacctttgacatgtcc
acctgcttcctgacggctctggcccaggatggggccatcaacgaggaggcgctgtcagtc
agccagctggaccaattatacggcagctacacccagagggtccaggccagcctccgcgcc
caggaagggttgctgggcaatgtgcaggcatctcaccaggagttctccagtctgaagcag
tccaactcggaagctaacgatcgtgaggaggtgttgaagaagctggcctctgcccacgac
agctatgtggagatcaccagcaacttgaaagagggcaccaagttctacaatgacctcacc
gagatcctgctgaagttccagaacaagtgcagcgatatcgtcttcgcccgcaagacagag
cgggacgaactcctcaaggagctgcagcagagcatcgccagggagcccagcgccccgtcc
ttcaatgtccccgcctaccagactaaccccaccgccacggccgccggacccaccccggca
cccaggaccgtcttccagcccgaggccaaagccccaccaccccagaggccccctcctccc
accttcaccccccaggctgcctctgcgcctggcaaccctcccagcaaccagccccaaaca
ggaaaccccccacccatggcccctccctcgcaggcccagggaccgccgtaccccacctac
cagggataccccgggtacgcctaccagatgccaatgggttacaacccgtatgcggcgtac
ggccagtacaacatgggaacccccatgcagccgttcgtcccctatcagcagggccccgtc
cctggacaggggggctaccctggggcccccccaacgcatcagtccccctatccctaccag
cagccggcccagcaagcaccacaccagccatacttccctcaaccttaa
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