Esox lucius (northern pike): 105012585
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Entry
105012585 CDS
T04894
Symbol
zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105012585 (zc3h12a)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
105012585 (zc3h12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
105012585
NCBI-ProteinID:
XP_010871829
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All DBs
Position
LG10:complement(13186285..13197021)
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AA seq
630 aa
AA seq
DB search
MMPAFHNNPPPHFIYERMHRSGPHCPAAEESGETPPDPGEAQLDFYRKLGYSPAQVWTVL
RRFGLNIDTNSVLGELVRTGVNPDEMEMEKERENVGGLDASQGEAVGSLPVTPSSWEDVG
CEERDALRPIVIDGSNVAMSHGNKEVFSCLGIQLAVNFFLDMGHNDITVFVPSWRKEQAR
ADVPISDQLILRELERKKIVVFTPSRRVAGKRVVCYDDRFIVKLAHESDGIIVSNDTYRD
LQGERPEWKRFIEKRLLMYSFVNDKFMPPDDPLGRHGPTLDNFLRKFPRLPQKQPCPYGK
KCTYGMKCKFDHPERANQSNCSVADELREKAKLHLSSHKYPTKGAGPAFDLTLEGMAQRL
TLEQGNGSLKNGHTSENVLLLRGGHRASWRSPVKKDKASRHTPTSLDLTPSCISQGQLDS
GLGSFESQASDPTRDYCNAGYGNCHSQPVLCMRPQRTSLPSSDPSCSFCSQPQPSMGVNP
GYHQHHSPRRSMGLAGPYSTHNHPGVMTYCSPCHLNDGHPMFPVGMRQYNHGSDLHQQGM
VQHPPQTYWSDPFVAHPQTLRSSGQGEPHKHWSPNLTQNSSGGWEKEEVRKKLLAIFNRH
LVDKAMDMFPQLMDPQRLAAEILTLQSRGL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatgccagccttccataataatccaccaccccatttcatctatgagagaatgcaccgc
agtggcccccactgtcctgccgcagaggagagcggtgagacacccccagaccctggagag
gctcagctggacttctaccgtaaactgggctattccccagcacaggtctggaccgtgctg
cggaggtttggcctaaacatagacactaacagtgtcctgggggagcttgtacggactgga
gttaaccccgatgagatggagatggagaaggagagggaaaatgtgggaggcctggatgcc
tcccaaggggaggctgtcggaagcctacctgtcacaccatccagctgggaggatgtaggc
tgtgaggaaagagatgccctgagacccatagtgatcgatgggagcaatgtggccatgagc
catgggaacaaggaagtgttttcgtgtctgggaatccagctggctgtgaacttcttcctg
gatatgggtcataatgatattacagtgtttgttccttcatggaggaaagagcaggcgagg
gcagatgtccctatctcagatcaattaattttgcgtgagctggagagaaagaagattgtg
gtgttcaccccttcacgacgtgtagcgggcaaacgagtggtctgctatgacgatcgcttc
atcgtcaagctggcgcacgagtctgacggcatcatcgtgtccaacgacacctaccgtgac
cttcagggagagaggccggaatggaagcgcttcatagagaagaggctgctcatgtactcg
tttgtcaatgacaagttcatgcccccagacgacccacttggtcgccatggtcccactctg
gataattttctgcggaagtttcctcggttaccacagaaacagccatgcccttatggaaag
aaatgtacttatgggatgaagtgtaaatttgaccacccggagcgagccaaccaatccaac
tgctccgtggctgatgagctacgggagaaggccaagctgcatttgtcatcacacaaatac
cccaccaaaggagctggacctgcttttgacttaacactggaggggatggcccagagactg
acccttgaacaggggaatggctccctaaagaacggccacaccagcgagaacgtgcttctg
ctccggggaggccatcgtgccagctggaggtccccggttaagaaggacaaggccagccga
cacacgccgaccagcctggacctgaccccgtcctgcatctctcagggccaactagactct
ggactgggctcctttgagagccaggcgtcggatcccaccagagactattgtaatgctggg
tacgggaactgccattcacagcctgtcctctgtatgagaccacaacgcacttccctgcct
agcagcgacccgtcttgtagcttctgttcccagcctcagccatccatgggggtgaaccca
gggtaccaccagcaccacagcccacgtcgtagcatgggtttggcaggcccttacagcacc
cacaaccacccaggtgtgatgacctactgctccccctgtcacctcaacgacggccacccc
atgtttcctgtcggtatgcgtcagtataaccacgggagtgacctccaccagcagggcatg
gtccagcatccaccgcagacgtactggtcagatccgttcgttgcccatcctcagactctc
cgtagctctggtcagggggagccacataaacactggtcacctaatctgacccagaacagt
tccggtggctgggagaaggaagaggtcaggaagaagcttttggccatttttaacagacat
ctggtggacaaggccatggacatgttccctcagctcatggacccacagagattggctgct
gagatcctaaccctgcagtctcgaggcctgtga
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