Esox lucius (northern pike): 105012725
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Entry
105012725 CDS
T04894
Symbol
ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
els
Esox lucius (northern pike)
Pathway
els03022
Basal transcription factors
els03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105012725 (ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
105012725 (ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105012725 (ercc2)
03036 Chromosome and associated proteins [BR:
els03036
]
105012725 (ercc2)
03400 DNA repair and recombination proteins [BR:
els03400
]
105012725 (ercc2)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105012725 (ercc2)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105012725 (ercc2)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105012725 (ercc2)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105012725 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
SesA
Motif
Other DBs
NCBI-GeneID:
105012725
NCBI-ProteinID:
XP_010872059
UniProt:
A0A3P9AAG2
LinkDB
All DBs
Position
LG01:complement(6489035..6497532)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
RAYPLEVTKLIYCSRTVPEIEKVVEELRKLMEYYSKEAGEKNNFLALALSSRKNLCVHPE
VSSLRFGKEVDGKCHSLTASYIRAQRHSNPSLPSCRFYEEFDALGRQVPLPAGVYNLDDL
KDFGRRKGWCPYYLARYSIVHANIIVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID
NVCIDSMSVNITRRTLDRSQANVETLQSTILKIKETDAAKLKEEYRRLVEGLKEANVARE
TDIYMSNPVLPDEVLQEAVPGSIRTAEHFVGFMKRFLEYLKARLRIHHVVQESAPQFLKD
ISEKVCIDRKPLRFCAERLRSLLRTLEIADIADFSAITLISNFATLVSTYSKGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFERFQSVIITSGTLSPLDIYPRILDFHPVTTAS
FTMTLARTCLCPLVVGRGNDQVAMTSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFT
SYIYMENIVASWYEQGILENVQRNKLIFIETPDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHLTDGSLNLTIDETVQLSKHF
LRQMAQPFKQEDQLGLSLLTLEQLQSEEMLQKIAQIAHQV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacatcgaagggttgttagtctatttcccatatgactacatttatccagaa
caatattcctacatgctggagctcaagaggaccctggatgccaaaggacatggagttctg
gagatgccgtcgggaaccgggaaaacaatctctcttctatcgctgatcgttgcttatcag
cgggcatatcccctcgaagtcaccaagctaatctattgctcccgaactgttcctgagata
gagaaggtagtggaggaattgaggaagcttatggagtactattccaaggaggcaggagag
aagaacaacttcctggctctggcactttcctctcggaaaaacctgtgtgttcaccccgag
gtgagctccttacgctttggaaaggaagtggatgggaaatgtcacagcctgacggcgtcc
tacatccgcgctcaacggcacagcaacccaagcctgccttcgtgccgcttttacgaggaa
tttgatgctctgggaaggcaggtgcccctccccgctggagtctacaatctggatgatcta
aaggactttgggaggagaaaaggctggtgcccctactacctggcacgctattcgatcgtt
catgccaacatcatagtttatagttaccactacctcctggacccgaagattgcagatctg
gtctccaaggagcttgccaagaaatcagtggttgtttttgatgaagcgcataacattgat
aacgtgtgcatcgactccatgagtgtcaacatcaccaggaggacgttggatcgtagccag
gccaacgtggagacccttcagagcactattctcaagatcaaggagactgacgctgccaaa
ctaaaagaggagtacagacgattggtggagggactgaaggaggccaacgttgccagggag
actgacatctacatgtccaatcccgtgctgccggatgaggtccttcaagaggctgttccg
ggcagtatccgcacggcagagcacttcgttggcttcatgaagcgtttcctggagtacctg
aaggcccggctgaggatccaccacgtggtacaggagagcgctccccagttcctcaaggac
atctctgagaaggtctgcattgaccgcaagcccctcagattttgtgctgagaggttgcgt
tcgttgctgaggacactggagatcgcagacatcgcggacttctcggccataaccctcatc
tctaactttgccactctggtcagcacgtacagcaaaggcttcaccatcatcatcgaaccg
tttgaagacagaacacccaccattgctaaccccgttctccacttcagctgtatggaccct
tccattgcaatcaagcctgtgtttgagcgattccagtccgtcatcattacatcagggacc
ctttctcctttggacatatacccccgaatcctggacttccacccggtcaccacggcgtcc
ttcaccatgacactggcacgcacctgcctttgccctctggtggtggggagggggaacgac
caggtggccatgacctcgaagtttgagacacgtgaagattttgcggtcatccgtaactat
ggcaacctgctgctggagatgtctgcgattgtgcctgacggtattgtggcgttcttcacc
agctacatctacatggagaatatagtggcttcgtggtatgaacagggcatcttggagaac
gtccagaggaacaagctgatcttcatagagaccccagacgctgcagagaccagcatggct
ctggagaaataccaggaggcctgtgagaacggcagaggggccattctgttgtctgtggcc
agggggaaagtgtccgagggaatcgacttcgtccaccactttggccgtgcggtgatcatg
ttcggagtgccttatgtctacacgcagagccgcatcctgaaggcccgtcttgagtacctg
cgggaccagttccagatcagggagaatgacttcctgaccttcgacgccatgcggcatgca
gcccagtgcgtgggccgcgccatcagaggcaagacggactacgggttgatgatctttgca
gacaagcgctacgcacgggcggacaagcgaggtaagctgcctcggtggatccaggagcac
ctcaccgacggcagcctcaacctgaccatcgacgagacggtgcagctgtccaaacacttc
ctgcgccagatggcccagcccttcaaacaggaggaccagttggggctgtctctgctgacc
ctggagcagctacaatcagaggagatgctgcagaagattgcacagattgctcaccaggtc
tga
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