Esox lucius (northern pike): 105012786
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Entry
105012786 CDS
T04894
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
els
Esox lucius (northern pike)
Pathway
els04137
Mitophagy - animal
els04140
Autophagy - animal
els04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105012786
04137 Mitophagy - animal
105012786
04148 Efferocytosis
105012786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105012786
Transcription factors [BR:
els03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105012786
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
TLP-20
HLH
Motif
Other DBs
NCBI-GeneID:
105012786
NCBI-ProteinID:
XP_028975853
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Position
LG01:complement(6636202..6654318)
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AA seq
649 aa
AA seq
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MDTKEERVGKRSNTEQRKVRSRDAARCRRSQETEIFYELAHTLPLARRVSAHLDKAAIMR
VTLSYLRMHCLLRSGDNSKEPIVEKKENPMDEFYPRALAGFIMVMTEEGDMIYLGDSVSK
HLGITQLELLGQSIYDFIHPCDQEELRDLLAPRPGMSKKKTAEQHTEMNFFLRMKCTLTS
RGRTVNIKSATWKVLHCTGHIRLCCSEEDSSPPAGSFMTVLCEPIPHPSSVEFPLDRSTF
LTRHSMDLHFTHCEGRVTELVGYKPDDLIGKSVFEFYHALDSDHVTKSLHTLLSKGQVCT
SHYRFLVKSGGFVWAETQATVIYNKTSQPEAVVCLNFILSAVEQADMVFSIEQTDRELKS
EPVSEASEETVCDSDQSCSKDPPVELNQNTEDLLHRAPDPGDTIIPLPDFVELSFCQPSS
PGAVPDFPQELCTPELWALLSPIFDHLSSSSSSPSSPSSSSSSSSSPSSPQPALALSPVE
ELPTEDEVEKLFVIRPDDSAQKECRMEGMEGMDLDMLAPYISMDDDFQLSFQLHENTDEA
SPESLGTTRKRTHDQDEDTPSQLIIQDKRQRHLAPPLEQKLLLSHALLESLEDADSPELG
PEPHPYRRSLLLTDRDPVLAGAQGLCDTAAMMRDLFLSRPPDPLTSSLT
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaaggaagagcgtgttggaaaacggtcaaacacggagcagcggaaggtgcgt
tcccgggatgcagcacgctgtaggcggagtcaagagactgagatcttctatgagctggcc
catactctaccattggcccgcagagtctccgcccacctggataaggccgctatcatgagg
gtgacactcagctatctgcgcatgcactgcctactccgttcaggtgataacagcaaagag
ccaatcgtggagaagaaggaaaacccgatggatgagttttacccacgggcgctggcaggc
ttcatcatggtgatgacagaggagggggatatgatctacctgggtgacagtgtcagcaaa
cacctgggcatcacacagctggagctgctgggtcagagtatttatgatttcattcatccc
tgtgaccaagaagagctacgcgatctcctggcacccagaccaggtatgtccaagaagaaa
acagcagagcaacacacagaaatgaacttctttctcaggatgaagtgtaccctgaccagt
agagggcgcacagtcaacatcaagtctgccacctggaaggtgctgcactgtacaggccac
attcgtctgtgctgcagcgaagaggactcgtctccccctgcaggcagctttatgacggtg
ctgtgtgagccgatcccacacccctccagtgtggagttccccttggaccgcagcaccttc
ctgacccggcacagcatggacctgcacttcacccactgtgagggcagggtgaccgagcta
gtgggatacaaacctgatgatctgattggaaaatctgtctttgaattctatcacgccctg
gactcggatcatgtgaccaagagcctgcacacccttctgtccaaaggccaggtgtgtacc
agccactatcgcttcctggttaagagtgggggcttcgtgtgggcagagacccaggctaca
gtcatctataacaagacctcccaaccagaagctgtggtctgcctgaactttatcctcagt
gcggtggagcaggcagacatggtgttctccatagagcagactgatagagagctgaagagt
gagcctgtctcagaggcctcggaggagactgtgtgcgacagtgaccagagctgcagtaaa
gatcctccagtcgagctgaaccagaacacagaggacctgctccatcgggcccctgaccca
ggggacaccatcatacccctcccagactttgtggagctgtcgttctgccaaccttcaagt
cccggcgctgtcccagatttccctcaggagctttgcacgccagagctgtgggcgctcctt
tcacccatatttgaccacctcagctcatcttcatcatcaccatcatccccatcatcatca
tcatcctcctcctcatcaccgtcatcaccacaaccagcactagcactgagtcctgttgag
gagctgcctacggaggatgaggtggagaagttgtttgtcatccgtccggatgacagtgcg
cagaaggaatgccgaatggagggcatggaggggatggatctggacatgctggctccctat
atctccatggacgacgatttccagctcagctttcaactccatgagaacacagacgaagcc
tcgccggagtccctggggacaaccaggaaacggactcacgatcaggatgaagacacgcct
tcccagttgattattcaggataagagacagagacacttggcgcccccacttgagcagaag
ctacttctgagccacgcactgctggagtccctggaggatgccgactccccagagcttggg
ccagagccacacccctataggcggagtctgctgctgactgacagagacccggtccttgca
ggagcccagggattatgtgacacagcagccatgatgagggacctcttcctgtcccgccca
ccagacccactgacctcttctctgacttaa
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