Esox lucius (northern pike): 105012942
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Entry
105012942 CDS
T04894
Symbol
lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
els
Esox lucius (northern pike)
Pathway
els04514
Cell adhesion molecule (CAM) interaction
els04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105012942 (lrrc4b)
04517 IgSF CAM signaling
105012942 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
els04515
]
105012942 (lrrc4b)
Cell adhesion molecules [BR:
els04515
]
Immunoglobulin superfamily
NGL family
105012942 (lrrc4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_14
ig
LRR_1
V-set
Ig_2
LRR_NXF1-5
VEGFR1-3_N_Ig-like
LRRNT
Motif
Other DBs
NCBI-GeneID:
105012942
NCBI-ProteinID:
XP_010872413
UniProt:
A0A3P8YV04
LinkDB
All DBs
Position
LG11:27545799..27575738
Genome browser
AA seq
733 aa
AA seq
DB search
MRITTVTCLPCPSPLLLLLAQLLLRLLVPGPESVGAASPCPTHCSCSNQASRVICTRQSL
DGVPESISVNTRYLNLQENSIEVIKSDTFKHLRHLEILQLSKNKISQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKRLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVKVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTTMTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADPSVSYFTTVTVETLEPIEGPTVYAGAMNIHNESYVITSSG
PAWGDGATTASSLSSWSLSSPRSTRPTFTVPITAETGYSGVDDVMKTTKIIIGCFVAITF
MAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGPGGRGSGISGGGTVPRDGGG
GGGGVGAGQSLRMHHPEMVNLPNLARQEHLNHYYKAHHFNNNMMGLTTGLNNNNNPSLSS
CPQNQSTPVSCAQGPTSTSSGTAAVSSLPSPVTLPQLGIHGSLKGLMGKGQNTQIEPLLF
KNGSKENVQETQI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgacctgccttccctgcccctcccccctcctcctcctattggcc
cagctgcttctgcggctcctcgtccctgggccagaatctgtaggggccgcctctccctgc
cccacccactgcagctgctccaatcaagcgagtcgagtcatctgcacaagacagagtctt
gatggagttcctgagagcatatcagtcaacacaagatacctcaacctgcaagagaattca
attgaggttatcaagtcggacaccttcaaacacttgaggcaccttgagatcctgcagctg
tctaagaacaaaatcagccagattgaggtgggagcgttcaatggcctgcccaacctcaac
acgctggagctgttcgacaaccgacttaccctggtcccctcacaagccttcgagtacctc
agcaagctgcgggagctgtggctacgaaacaaccccatcgagaccctgccaggctacgcc
ttccaccgggtgccctcgctgcgccgcctggacctgggcgagctcaagaggctggactac
atctcggacgcagccttcgtcggcttggtcaacctacgctatctgaacctgggcatgtgc
ggtctgaaggacatccccaacctgacagccctggtgcgcctggaagagctggagctgtcc
ggaaaccgcctggagatcatccggcccggctcctttcagggcctggtgtccctccgtaag
ctctggctgatgcactcacaggtcaaggtcatcgagcgcaacgcctttgatgacctgaag
aacctggaggagctcaacctgtcccacaactccttgcactcgctgccacacgacctcttc
accccgctgcaccagctggagagggtccacctcaaccacaacccctgggtgtgcaattgc
gatgtcctgtggctcagttggtggttaaaggagactgtgcccagcaacaccacgtgctgc
gcccgctgccacgcgccacccggcctgaagggcaggtacatcggggagttggaccagagc
cacttcacctgctacgccccggtcatcgtggagccgccgactgacctcaacgtcaccgag
ggcatggcggcggagctgaagtgtcgcacgggcaccaccatgacctcggtcaactggatc
acgcccaacggcaccctgatgacccacggctcctacagggttcggatctcggtcctgcat
gacggcacgctgaacttcaccaatgtcacgctgagggacacgggccagtacacctgcatg
gtgaccaactcggccggcaacaccacggcgacggcggtcctcaacgtcaccgccgccgac
cccagcgtcagctacttcaccactgtcaccgtggagacgttggagcccatcgagggtccg
accgtttacgccggcgccatgaacatccacaatgagtcgtacgtcattacctcttctggt
ccggcgtggggagacggtgccaccaccgcctcgtctctttcgtcctggtccttgtcctcg
ccccggtccacccggcccacctttactgtgcccatcactgccgagacaggctactccggc
gtggacgacgtgatgaaaaccaccaagatcatcatcggctgcttcgtggccattaccttc
atggcggccgtgatgctggtcgtcttctacaagctgaggaagcagcaccagctgcacaag
caccacggccccgcccgcgccatcgagatcatcaacgtggaggacgagatcggagccggg
cccgggggacgtgggagcggcatctcgggcgggggcaccgttcctcgtgatggcggagga
ggcgggggtggggtgggagctgggcagagcctgaggatgcatcacccagagatggttaac
ctgcccaacctggccagacaggagcacctcaaccactactacaaggcccaccacttcaac
aacaacatgatgggcttgaccacaggcctcaataacaacaacaacccctccctttcctcc
tgcccccagaaccagagcacccccgtgtcctgtgcacagggtcccacctccaccagcagt
ggcaccgctgcagtcagctccctgccctcccctgtaaccctgccccagctggggatccat
ggctcactgaaggggctcatgggaaaaggccagaacactcagatagagccactgctcttc
aagaatggctctaaggaaaatgtgcaagagactcagatctga
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