Esox lucius (northern pike): 105013468
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Entry
105013468 CDS
T04894
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
els01001
]
105013468 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
els04054
]
105013468 (ciita)
Enzymes [BR:
els01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105013468 (ciita)
Protein kinases [BR:
els01001
]
Serine/threonine kinases: Other
TAF1 family
105013468 (ciita)
Pattern recognition receptors [BR:
els04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
105013468 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_14
LRR_4
AAA_16
nSTAND3
nSTAND_NTPase5
AAA_22
TsaE
VapE-like_dom
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105013468
NCBI-ProteinID:
XP_028979638
LinkDB
All DBs
Position
LG11:complement(2705545..2732710)
Genome browser
AA seq
1487 aa
AA seq
DB search
MFSSERHEEYDSNMMILCKCVFWSADVWMQDRPSSPASEDEDLMPGFDLQSLLEDLNQTL
ESDSMLTTNVRADEQTKTLMHWRDLDLETLLENVDAPLTPNPKNFDLETIVDNGDDHVKL
NDFDLETLLDNVCNNMEFNDRLFELGFEADTQTGEALKLSNPVEPEAKKKICKRRGEIRT
DCDRQSKRGKRRAKTKESRVNSCAGSPPIQATMVTSPHPSGLFQVTSSPTSSLQPSITPS
LHPTVFHITQLGPAFSLSPTVFSSSGQHTYLLVSSLVPQSHNILPLCPVDSAVAPDSMCS
SPPGSRSDCASMSPQVMSPPSASPISPKTDCVADYILQTKAYIKTLYQEIEAGRSLETHY
IDVRLVQRQILIGSGKNASKCLEKELVVLGDTERRWSSLSRSQMFQSSAGAKPKQSIVLL
GNAGMGKTTLIKKLCLDWSDGFLPQFDFVFLLDGKALTLPHERTYSLQSLLLRLSSSALP
TPCARPHAVFSRVLSAPERVLVIFDGFEAVRDLEGLTQCPAVECRGQNYNIRQLFSGLLQ
RKLLPGCSLLLSARPQGTVSGLLRRADSLLELLGFSPHDIERYFGLYFSGRHSLRTPVPS
STSTRDTVPSSTSTLDTVPSSTSTRDTVPSSTSTIVTVPSSTSTRDTVPSLTSTRDTVPF
STSTRDTVPSSTSTRDTVPSSTSTLDTVPSSTSTRDTVPSSTSTRDTVPSSTSTRDTVPS
STSTRDTVPSSTSTRDTVPSSTSTLDTVPSSASTLDTVPSSTSTPATLQAVNTVLDTVMA
RLHNHSYLMSLCWNPALCHMVCLLLEHWDGSKPLPSTLTGLCHTVLGLMIRHSPKNSPPH
TQKELHSPKHTRPQTENEPHSPEHTHTQKEAHSPEHTHAQKEAHSPEHTHAQKESHSPEQ
THTHKEPHSPEHIDTQTYNHSREHTLSQRETQTHTRTDTQTHANTPEEGQKRRLKPTNGH
TVTHMRTRSHTQTQTTSAEEKRKEEDERGRHVLSGLNDVAWDGVKGHSSLLNLTRHNPMY
VQLQEFGLTTGLLHSYWLRGWQGGDCGSDDSSCDNILSWGSPYLQSFLGGAHLSLSKCVS
DRALISQILPQSRGRRRPLGECLDLAQRLAVGLLFRNEEELQDLAVLDSISIDAVVAKRS
AVSSHLENLPYGTLSPARLLAAFHCVYEAGEARLARQLVRKLPAVLSLGRVPLCPPDAVV
VWNLLEQCRNQRRQFCLDLEDTGLSVSGLRLLTGLNIIHSYRACIADTVAMWEELEKSGE
VELLKGTVSKLNINPFRATQVSHVQHLATLVNIHRKRRLPDSQSDSVLEDGIPAVRDLHK
LEFELGPVNGPLALPKLLELLPALQSLQHLDLENSKLGDRGSECLAEAVGSLYSLEILNL
SQNHIGDQGIGMLAPALCNLTSLNCLSLYSNVISDGGAESLAAVLPQMTSLNDLDVKYNK
FTAVGAQSLGSSLRNCPWVKSLGLWNQCIPYGVLERLQEQDPRIQLL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaagtgaacgacatgaagagtatgactccaacatgatgatcctatgtaaatgt
gtgttttggtcagcagatgtctggatgcaagataggccctcttcccctgcctctgaggat
gaagatcttatgccaggatttgacctgcagtcccttctggaagatttgaatcaaactttg
gaaagcgatagcatgctgacaaccaatgtcagggcagatgagcagacaaagaccctgatg
cattggagagatcttgacctggagacacttctagaaaatgtggatgcccctttaaccccc
aaccctaaaaattttgacctggagaccattgtggacaatggggatgatcatgttaaatta
aatgatttcgacttagaaacccttctggataatgtgtgtaataacatggaattcaacgac
aggctgtttgagctgggctttgaggctgacacacagactggcgaggctctcaagttgtca
aaccctgtcgaacccgaggccaagaaaaagatctgcaagcgacgtggagagatccgtacg
gattgtgacagacagagcaagagggggaagaggagagcgaagacgaaggaatcccgggtc
aacagctgtgctggctcgcctcccatccaggccaccatggttacaagccctcatccttcc
gggctctttcaggtcacctcatcccctacttcatccctccagccttcaatcacaccatcc
ctccatcccactgtgtttcacattactcagctgggtccagccttcagcctctcccctact
gtattcagctcctcaggacaacacacatacctactagtgtcatccctggtcccccaaagc
cacaacatccttcctctctgcccagttgacagtgcagtagctccagactcgatgtgctca
tccccccctggttctcgatctgactgcgccagcatgtctccccaagtcatgtctcccccc
tctgcctcccctatctcccccaagacagactgtgttgcagattacatactccaaaccaag
gcgtacatcaagacactgtaccaggagatagaggcgggccgtagcctggaaacccactat
attgatgtccgattggtccagaggcagatcctgattggctcaggaaagaatgccagcaag
tgcctggagaaggagctggttgtcttaggagacacagaaaggaggtggagctcgttgtcc
aggagtcagatgttccagagctcggcaggggcgaaacccaagcaatccattgtgttgcta
ggaaatgctggcatgggcaagaccacactcatcaaaaagctctgcctggattggtccgac
ggcttcctgcctcagtttgactttgtattcctattggacggtaaggcactgaccctcccc
catgagcggacctacagccttcagtccctcctcctacgcctctcctcctccgccctcccc
actccatgtgcccgaccccatgcagtcttcagtcgggtgctctccgccccggagcgcgtg
ctggtgatattcgacggctttgaggcggtgcgtgacttggagggcctgacgcaatgccca
gcggtggaatgtagggggcagaattacaacatcagacagctgttctctggcctgctccag
aggaagctcttaccaggatgctctctcctgctttctgctcgaccgcagggcactgtgagt
ggtctgctgagacgggctgacagcctcctggagctgctgggcttctcccctcacgacata
gagagatactttggactgtacttttctggaagacactcactacggaccccagttccatcc
tcaacttcgactcgagacacagttccatcctcaacttcgactctagacacagttccatcc
tcaacttcgactcgagacacagttccatcctcaacttcgactatagtcacagttccatcc
tcaacttcgactcgagacacagttccatccttaacttcgactcgagacacagttccattc
tcaacttcgactcgagacacagttccatcctcaacttcgactcgagacacagttccatcc
tcaacttcgactctagacacagttccatcctcaacttcgactcgagacacagttccatcc
tcaacttcgactcgagacacagttccatcctcaacttcgactcgagacacagttccatcc
tcaacttcgactcgagacacagttccatcctcaacttcgactcgagacacagttccatcc
tcaacttcgactctagacacagttccatcctcagcttcgactctagacacagttccatcc
tcaacttcgactccagccacactccaggccgtaaacactgttctagacacagttatggcc
aggctccacaaccactcatacttgatgtctctgtgttggaacccagctctttgtcacatg
gtgtgtctgcttctagaacactgggatggttccaagcccctcccctcaactctgacggga
ttgtgtcatacagtgctgggactaatgataagacacagccccaaaaacagccccccacac
acacagaaagaacttcacagccctaaacacacacgcccacagacagaaaatgaacctcac
agccccgaacacacacacacacagaaagaagcacacagccccgaacacacacacgcacag
aaagaagcacacagccccgaacacacacacgcacagaaagagtctcacagccctgaacaa
acacacacacataaagaaccacacagccccgaacacatagacacccagacatacaatcac
agccgtgaacacacactcagtcaaagagaaacacaaacacacacaaggacagacactcag
acccacgctaacacccctgaagagggtcagaaacgtagacttaaaccaacaaacggccac
acagtaacccacatgcgcacgcgctcacacacccaaacccagactacatcggcagaggag
aagaggaaggaagaggatgaacgtggcagacatgttctgtctgggttgaatgatgtggcc
tgggatggggttaaaggtcattcctctctcctgaacctaacccgacacaaccccatgtac
gttcagctgcaggagtttggccttacgactggcctgctacattcctattggctgagaggg
tggcagggaggtgactgtggcagtgatgatagcagttgtgacaacatcctgtcgtggggc
agtccctacctgcagagcttcctgggcggggctcacctgtccctgtccaagtgtgtgtct
gaccgtgccctcatctcccagatactaccccagtccagggggaggcgacgacctcttggt
gagtgtctggaccttgctcagagattggctgttggtctactgttccggaacgaggaggag
cttcaggatctggcagtcctggattcaatctcaattgatgcggtggttgccaagcgatcc
gctgtttcgtcccacctggagaaccttccctatggaaccctaagccccgcccgcctcctg
gcggcatttcactgcgtctatgaggcgggcgaagcccgcctggcgagacagctggtacgc
aaacttcctgccgttctgtcactgggaagagtgccgctctgcccgcccgacgctgtggta
gtgtggaatcttctggagcagtgtagaaaccagcggagacagttctgtctggacctggag
gacactggactgagtgtatctgggctccgcctactgacaggcctcaacattatacactca
tacagggcgtgtattgcagacaccgtcgccatgtgggaggagttagagaagagtggggag
gtggagcttcttaaagggacggtgtctaagttgaacattaaccctttccgagcaacacag
gtgtcccacgtacaacacctggctacacttgtcaacatacacagaaagagaagactaccc
gacagccaatcagatagtgtcctggaggatggcatacctgcagtcagagatctacacaag
ctggagtttgagctgggtccagtgaatggtcctctggcgctgcctaaactacttgagctg
ctgccagccctgcaaagccttcaacacctggacctagagaacagtaagttgggggacaga
ggatcagaatgcctggctgaggctgtgggatccctctactctctggagattctcaatctg
tctcagaaccacattggagaccagggaatagggatgctggctccagctctgtgtaaccta
acctcactgaactgcctcagtctgtacagtaatgtgatatctgacggaggagcggagagt
ctcgctgctgtactgcctcagatgacatctctcaatgacctggatgtcaagtataacaag
ttcactgctgtgggagctcagagtctgggatccagtctcaggaactgcccttgggtgaag
agtttggggttatggaaccagtgtattccatatggggtgttagaacgattacaggagcag
gatccacggatacagcttctctag
DBGET
integrated database retrieval system
