Esox lucius (northern pike): 105013530
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Entry
105013530 CDS
T04894
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
els
Esox lucius (northern pike)
Pathway
els04110
Cell cycle
els04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105013530 (smc1a)
04114 Oocyte meiosis
105013530 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
els03036
]
105013530 (smc1a)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
105013530 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
105013530 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
SlyX
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105013530
NCBI-ProteinID:
XP_028979982
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All DBs
Position
LG12:7420146..7435864
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AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYHEDSGEERTFTRIIIGSSSEYRINSKVVALAEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVKAHVQMQLFKLYHNDAEIEKLNR
ELAHRNKEIDKDRKKMDHVEEELKEKKKELGRMMRDQQTVEKEIKEKDAELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKLYKKRKGDMDELEKEQLAVEMARQEFDDRMEEEAQS
QGQDLTLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKFREIEENQKRIEKLEDYISTSKQSLDEQKRMEEELTEEVETAKKRIDEINLELNQV
MEQLGDARIDRQENSRQARKAEIMESIKRLYPGSVYGRLIDLCQPTQKKFQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREKEVNNLRDRMNVVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQLDYERNQLKEDQEKVMMWEQ
TVKKDEAEIEKLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHQMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDIGQGEGSSQQE
ESSSSQRTSSTVLAKEALIEIDYSNLAEDLKDALAEDEIKAEINTLQQRLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVNTQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSVYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttgaaactaatagagattgaaaacttcaaatcatacaagggcaggcaaatt
atcggtccctttcacaagtttaccgcgattattggacccaatggttccggcaagtccaac
cttatggacgccatcagctttgtactggccgagaaaaccagtaacctgcgtgtgaagact
ttgaaggacctgatccatggagccccagtagggaagccagctgccaacagagcgtttgtg
agcatggtgtaccacgaggatagtggagaagagcgcaccttcaccagaatcatcattggc
tcgtcatcagagtaccgtatcaacagtaaggtggtggctctggctgagtacagtgaggag
ctggagaaactaggcatcctcatcaaggccaggaacttccttgttttccagggggcagta
gagtcaatagccatgaagaaccccaaggagcgtactgctctgtttgaagagatctcccgg
tctggggagctggctcaggagtacgatcgcaggaagaaggagatggtgaaagctgaggag
gacacacagttcaactaccatcgcaagaagaacattgccgctgagcgcaaagaggcaaag
caggagaaagaggaggctgagcgttaccagcgtctgaaggacgaggtggtgaaggcccat
gtccaaatgcagctgttcaagctgtaccacaatgatgcagagatagagaagctcaaccgc
gagctggcgcatcgcaacaaggagatcgacaaggaccgcaagaagatggaccacgtggag
gaggagctgaaggagaagaagaaagagcttggaaggatgatgagggaccaacagactgtg
gagaaagaaatcaaggagaaggacgctgagctcaaccagaagcgcccccagtacatcaag
gccaaagagaatacctcccacaagattaagaaactggaggcggccaagaagtccctccag
aacgcccagaaactgtacaagaagaggaagggggacatggacgagttggagaaagaacag
ttggccgtggagatggcccggcaagagtttgacgaccgcatggaggaggaggctcagagc
cagggacaggacctcacgctggaggagaaccaggtcaaggcctaccaccgcctgaaggag
gaggccagtaagagggcagccactctggcccaggaactggagaagttcaacagggaccag
aaggctgaccaggaccgcctcgacttggaggagaggaagaaagtggagactgaggccaag
atcaagcagaagttccgcgagatagaagagaaccagaagcgtattgagaagctagaggac
tatatctccaccagcaagcagtccctagatgagcagaagaggatggaggaggagttgacc
gaggaggtggagacggctaagaagagaatcgacgagatcaacttggaactcaaccaggtg
atggagcagctgggagatgccaggatcgacaggcaggagaacagcaggcaggcgcgcaag
gccgagatcatggagagcattaagagactgtatcccggatctgtgtacggccgtctgatt
gatctgtgtcagcccacacaaaagaagttccagatcgctgtgaccaaggtgctgggcaag
aacatggacgccatcatcgtggactctgagaagacgggcagagactgcatccagtacatc
aaggagcagagaggagagccggagaccttcctgcccctcgactatttagaggtgaagccc
accgacgagaagctccgtgagctgcgcggggccaagctggtgatcgacgtgatccgctac
gagccgccgcacatcaagaaggccctgcagtacgcctgtggcaacgcgctcgtctgtgag
aacgtggaggacgcccggcggatcgcctttggagggccctacagacacaagacggtggcc
ctcgacggcactctgttccagaagtcgggtgtgatctctgggggagccagtgacctgaag
gccaaggcccggcggtgggatgagaaggctgtggacaaactcaaggacaagaaggagaaa
ctcactgaggaactcaaggagcaaatgaaggccaagaggaaggaggcggagctacgccag
gtccagtctcaggctcatggtctccagatgagactgaaatactcccagagtgacctggaa
cagaccaagacacgacacctctccctcaacatgcaggagaagtccaaactggagagtgag
ctggctaactttggccctcgtattaatgacatcaagaggattatccagtcccgggagaag
gaggtcaataatctgagagaccgcatgaacgtcgttgaagatgaggtgtttgtcgagttt
tgtaaggagattggtgtaaggaacatcagagagttcgaggaagagaaggtcaagaggcag
aatgagattgccaagaaacggctggagtttgagacccagaagacccgtctgggcattcag
ctggactatgagaggaaccagctgaaggaggaccaggagaaggtcatgatgtgggagcaa
actgtcaagaaggacgaggcggagatagagaaactgaagaaggaggaacaccgtcacatg
aagatcatagacgagacgatggcccagctgcaggaccttaagaaccagcacctcaccaag
aagtcagaggtcaatgacaagaaccaccaaatggaagagatacgcaagaaactgggagga
gccaacaaggagctcacccagctgcagaaggaggtgacggccattgagaccaagctggag
cagaaacgcagcgaccggcacaacctgctgcaggcctgtaagatgcaggacatcaggctg
cccctacgctccgggaccatggacgacatcggacagggagaggggagctcccagcaggag
gagtcgagcagcagtcagaggacgtccagtaccgtcctggccaaagaggctctcatagag
attgactacagcaacctggctgaggacctcaaggacgccctggcagaggatgagatcaag
gctgagatcaacacgctacagcagcgtctcaacgagcagcagtccatcctgcagaggatc
agcgctcccaacatgaaggccatggagaaactggagtctgtcagggacaagtttcaggag
accagtgacgagtttgaggcggcccgtaagagggcgaagaaggccaagcaggcttttgag
cagatcaaaaaggagaggtttgaccgcttcaacgcctgttttgagtctgtagccaccaac
atcgatgagatctacaaagccttgtcccgtaacagcagtgcccaggcctttctggggccg
gagaacccggaggaaccctacctggacgggatcaactataactgtgttgcccctggtaag
aggttcaggcccatggacaacctctctgggggggagaagaccgtggcggccctggctctg
ctgtttgccatccacagctacaagcccgcacctttctttgtcctggacgagatcgacgcc
gcgctagacaacaccaacattggcaaggtggccaactacatcaaggaccagtcagtgaac
acccaggccattgtgatctccctgaaggaggagttctacaccaaggccgactctctcatc
ggagtctatccagagcaaggagattgcgtcatcagtaaagtgctgacctttgacctgtct
gtgtaccccgacgccaacccgaaccccaacgagtag
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