Esox lucius (northern pike): 105013847
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Entry
105013847 CDS
T04894
Symbol
ybx1
Name
(RefSeq) nuclease-sensitive element-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105013847 (ybx1)
03019 Messenger RNA biogenesis [BR:
els03019
]
105013847 (ybx1)
03041 Spliceosome [BR:
els03041
]
105013847 (ybx1)
Transcription factors [BR:
els03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
105013847 (ybx1)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
105013847 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
105013847 (ybx1)
Spliceosome [BR:
els03041
]
Common components
Common spliceosomal components
General mRNP proteins
105013847 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
105013847
NCBI-ProteinID:
XP_010873967
UniProt:
A0A6Q2ZL13
LinkDB
All DBs
Position
LG12:22281234..22289150
Genome browser
AA seq
325 aa
AA seq
DB search
MSSEAETQQPPEPAVDAESPSSPAAAASAGDKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPAGVPVQGSKYAA
DRNRYRRYPRRRGPARDGEYPDNYQSDGEGEGERPPRKSREGAESAPEGEMQPQQRRPPF
PGRRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDENQGGPDQGNKPMRQNYYRGFRPR
FRPSRGGGPPRPRPVRDGEGENKENQGGDGENQEPRQRRYRRNFNYRRRRPQTGGKPQDG
KEAKADGEPSTEKTSAPAAEQGGAE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaacaaccgccggagcctgccgtcgatgcggagagccca
tccagcccggcagccgcagcttccgcgggggataagaaggtcatcgcaactaaggtcttg
ggtacagtcaaatggttcaatgtcagaaatggctacggtttcatcaacaggaatgacaca
aaagaagatgtctttgtccaccagacagccataaagaaaaacaacccaagaaaatacctt
cgcagtgttggagatggagaaactgtggagtttgatgtggttgaaggggagaagggcgca
gaggcagccaatgtcaccggcccggcgggtgttcccgtccagggtagcaagtatgctgct
gaccggaaccgctacagacgctacccccgcaggaggggcccagcacgcgacggcgaatac
ccggacaactaccagagcgacggcgagggtgaaggagagcgccccccccgcaagagccgt
gagggtgccgagagtgcccccgagggagagatgcagccccagcagcgcaggccccccttc
cccgggagacggcgctaccccccatactttgtacgtagacgctacggccgtcggcccccg
tacaccaacgcacctcgcggagagatgactgagggtggagaaggtgacgagaaccaggga
ggtccagaccagggcaacaaaccaatgaggcagaactactacagaggcttccgaccaagg
tttagaccaagcaggggtgggggtccaccacgtccaagaccggtgcgggatggcgagggg
gaaaacaaagagaaccagggtggtgatggtgaaaaccaggagccccgccaacgccgctac
cgccgaaacttcaactaccgccgcagacgcccacagactggcgggaagccccaggatggc
aaggaggccaaagccgacggtgaaccatccaccgaaaaaacgtccgctcccgcggccgag
cagggcggggctgagtag
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integrated database retrieval system
