Esox lucius (northern pike): 105013961
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Entry
105013961 CDS
T04894
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105013961 (dhx35)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105013961 (dhx35)
Spliceosome [BR:
els03041
]
Complex C
Other components
Complex C specific factors
105013961 (dhx35)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
nSTAND3
Cas3-like_C_2
AAA_7
PG_binding_1
AAA_30
Motif
Other DBs
NCBI-GeneID:
105013961
NCBI-ProteinID:
XP_010874161
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Position
LG12:25226729..25240775
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AA seq
699 aa
AA seq
DB search
MAAPLSTMKFWKPGSEAPGISEEREVTTETTLSPIIFNPYTALSIEKQRQKLPVFKHRNN
ILYLVENYQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAISVANRLAE
ERGALLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFQEFFNLNETGDPNQDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSMLQEQARALG
RYAMKKHLKVLPMYAGLPYVDQMKVFERTPPTVRKVVVATNIAETSITINGIVFVIDCAF
VKLRAYNPRTAIESLVVTPISKASASQRAGRAGRNRAGKCFRLYTEEDFEKLPASTVPEM
QRTNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLYALGGLDQYGRLTDPMGFR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVVPSNQKKPAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAVTVREQLRRLMNKFKVPRTSSEGD
PDVILRCIVSGFFANAARIHHSGSYRTLRDDRELHIHPNSVLFGEKPPKWVVFNEVVQTS
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccctctccacgatgaaattttggaaaccgggttcggaggcacctggtata
tctgaggagcgggaggtcacgaccgaaacgactctctcccccataattttcaacccttac
actgcgctgtccatagagaagcagagacaaaaacttcctgttttcaagcacagaaacaac
atcctctacttggtggagaattaccagacagttatcatcgtaggagagacaggatgtggg
aaaaccacacagatcccccagtatttgctggaggctggctgggcagctgaggggaaggtg
attggtgtgacacagcctcgtcgagtggctgctatctcagtagccaatcgtttggcagaa
gaacgtggagccctgttggggcatgaggtcggatatactatccgctttgacgactgctct
gaccctcatgccacccgcattaagtttctgacagatggaatgctggtgagagagatgatg
gctgatcctctactgaagaagtacagtgtcctaatgcttgacgaggcccatgagagaacc
ctctacactgacatagccatcggtctgctaaagaagattcagaagaagcgcagagacctc
cgcttgattgttgcatctgccaccctggatgcgaagaaattccaggagttcttcaacctg
aacgagacaggagatcccaaccaggatacgtgtggaattctgacagtggagggacgcact
ttcccagttgacgtcttttacaccgtcagcccagtcccagactatgtgaaggccaccgtg
gaaactgtgctgaagatccacgagacagaggatgatggcgatgtcttggccttcctcact
ggacaggaggaggtggagaaggtggtgtctatgcttcaggagcaggccagagccctgggc
cgctacgccatgaagaaacacctcaaggtgctgcccatgtacgcaggcctgccgtacgtg
gaccagatgaaggtgtttgagaggacgccccctactgttcgcaaggtggtcgtggccacc
aacatagccgagacttccatcaccatcaatggcattgtgtttgtgatcgactgtgcgttc
gtcaagctgcgggcgtacaacccccgcaccgccattgagtcgctggtggtcactcccatc
tccaaggcctcggccagtcagcgggccggacgagctggacgcaaccgagccgggaagtgc
ttcaggctttacacggaggaagattttgagaagctacctgcatcgacagttcctgagatg
cagcgcaccaacctggctcctgtcattctgcagctcaaagccctgggcatagacaacgtg
ttgcgcttcagctttctctctcccccaccggctcagtctatggtccaggcgctggagctg
ctttatgccctggggggtttggaccagtacggtcgcctaacggaccccatgggattccgc
atggctgagttccccctcagccccatgtttgccaagatgctgcttgagtcagggaacttt
ggctgttccaaagagattgttaccatagcagccatgatgcagatccaaaacatatttgtg
gtgccatccaatcagaagaaaccagcggcacgggagcacaggaagtttgctgttgcggag
ggcgatcatctgaccatgctgaatgtctacgaagccttcatcaagcaccagaagagctcc
cagtggtgtcaggaacacttcctgaactacaagggcctgctgcgagcagtgactgtacgg
gagcagctccgccgtctcatgaacaagttcaaggtcccacgcacctccagcgaaggtgac
cctgacgtgatcctgaggtgcatcgtgtctggtttcttcgccaacgccgcccgcatccat
cactcaggatcctacaggactctccgggatgaccgagagcttcacatccacccgaactcg
gtgttgtttggagagaagcctccgaagtgggttgtcttcaatgaagtcgtgcagacctcc
aagtattacatgcgcgacgtcacagcggtggagtcgtcttggttggtcgagctggcgcct
cacttttacaagcaggctaagcacgggtcattggccagcaagagatccagggttctctga
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