Esox lucius (northern pike): 105014097
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Entry
105014097 CDS
T04894
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
els
Esox lucius (northern pike)
Pathway
els03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105014097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105014097
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105014097
mRNA degradation factors
5'-3' decay
Lsm complex
105014097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
105014097
NCBI-ProteinID:
XP_010874418
UniProt:
A0AAY5KW26
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Position
LG13:complement(28216330..28222712)
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIDDIDKKHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDMDKPCDTVLQQVSIEEILEEQRLQQQAKQETEKAKVTALKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgccagggacggcgagtctcatcgatgatatagacaaaaagcatcttgta
ctacttcgcgatggaagaacgcttattgggtttcttagaagtattgaccagtttgccaac
ctagtttttcatcaaacagtggagcgcatccatgtgggcaagaagtttggggacattcct
agaggaattttcattgtaagaggagagaatgtggttttgcttggagagatagacatggat
aagccgtgtgacacagtcttgcagcaggtttctatagaggagatcctagaggagcagcga
ttgcaacagcaagccaagcaggagactgagaaagccaaggtgactgcactgaaggacaga
ggtctatccatccccaaggcagataatcttgatgaatattga
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