Esox lucius (northern pike): 105014273
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Entry
105014273 CDS
T04894
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
els
Esox lucius (northern pike)
Pathway
els03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105014273 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105014273 (cstf3)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105014273 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_19
TPR_6
TPR_16
Motif
Other DBs
NCBI-GeneID:
105014273
NCBI-ProteinID:
XP_010874753
UniProt:
A0AAY5KLX3
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Position
LG02:complement(9201945..9218572)
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AA seq
716 aa
AA seq
DB search
MSTEATADQTAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAVQVEMWKKYIQWEKSNPLRTEDHTLITKRVMFAYEQCLLVLGHHPDVWYEAAQF
LEYSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLRKNMLLYFAFADYEESRMKHEKVH
SIYNRLLAIEDIDPTLVYIQYMKFGRRAEGIKSGRIIFKKAREDMRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFTAFRDEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAALLQTETVVTPSAPTQKDEADRKPEYPKPDTNQMIPYQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFVGPFVQVDELMENFRRCTLPETVDAAVELIT
GRQPDASGDGNGPMENHAVAKSLKRPNADSDEEEDKGAVAPPVHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggaagcaaccgcagaccagacagcggagtatgtcccagagaaggtcaagaag
gcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgattcga
gaagcacagaaccaacctatagacaaagcaaggaagacgtatgaacgacttgttgcccag
ttcccaagttcgggcagattctggaaactattcattgaagctgagatcaaggcaaaaaac
tatgacaaggtagaaaagttatttcagagatgtctgatgaaagtgttgcacatcgacttg
tggaagtgctacctctcctacgtccgagagaccaaagggaagctgcccagttacaaagag
aagatggcccaggcgtatgactttgcgctggataaaattgggatggagatcatgtcctac
cagatatgggtggattacatcaacttcctcaaaggagttgaagcggttggttcatatgct
gaaaaccagcgaatcacagctgtgcgcagggtctaccagaggggctgtgtgaaccccatg
atcaacattgagcagctttggagagactacagcaagtatgaggagggcatcaatgtgcat
ctggctaagaagatgatcgaggaccgcagcagagactacatgaatgctaggagggtggcc
aaggagtatgaaacagtgatgaagggcctggataggaacgccccatcagtgcctccgcag
aactccccccaggaggcggtgcaggtggagatgtggaagaagtacatccaatgggagaag
agcaaccccttacgcactgaggaccacacgctcattactaagagagtgatgttcgcctac
gagcagtgcctgttggtgctgggccatcaccctgacgtgtggtacgaggcggcccagttt
ctggagtactccagcaagctcctggcagagaagggggacatgaacaactccaagctgttc
agcgacgaggcagcgaacatctacgagcgtgccattggaactctactgaggaagaacatg
ctgctgtactttgcatttgccgactatgaggagagtcgaatgaagcacgagaaggtccac
agcatctacaaccgtctgttggccatcgaggacatcgaccccaccctggtctacatccag
tacatgaagtttggcaggcgggccgagggcatcaagtcgggacgcattatcttcaaaaaa
gcccgggaagacatgcgcacgcgccaccatgtctatgtgacagcagcactaatggagtac
tactgcagcaaggacaaatcggtggcctttaagatatttgagctgggcttgaagaaatat
ggagacattccagagtatatacttgcgtacattgattacctctcgcaccttaacgaggac
aacaacactagagttctatttgagcgtgttctcacctcaggaagcctgtcgccagagaag
tctggtgagatctgggcccggttcctagccttcgagagtaacatcggggacctggccagt
atcctgaaggtggagcgcaggcgtttcactgccttccgggacgagtatgaaggcaaggag
acggcgctgcttgtggaccggtacaagtttatggacctgtatccctgctccgctagtgaa
ctcaaagcccttggatacaaggatgtgtcccgtgccaaactggcagcactgctccagact
gagacagtggtgaccccgtccgctcccacgcagaaggacgaagcagaccgcaagccagag
taccccaaacctgacaccaaccagatgatcccctaccagccacgccacctcgccccccct
ggactgcaccctgtaccgggaggagtgttcccggtcccccctgccgcggttgtcctaatg
aagctactgcctccacccacctgctttgtgggtccctttgtgcaagtggacgagctgatg
gaaaacttcaggagatgtacactaccagagactgttgacgcggctgtggagttgatcacc
ggccggcagcctgacgccagcggagatggcaacggccccatggaaaaccacgccgtggcc
aagtccctgaagagacccaacgcggactcggacgaagaggaggacaagggcgccgtggcc
ccgcccgtacacgacatttaccgcgctcgccagcagaagcgaatccggtga
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integrated database retrieval system
