Esox lucius (northern pike): 105014275
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Entry
105014275 CDS
T04894
Name
(RefSeq) thrombospondin-4-B isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
els
Esox lucius (northern pike)
Pathway
els04145
Phagosome
els04510
Focal adhesion
els04512
ECM-receptor interaction
els04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105014275
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105014275
09144 Cellular community - eukaryotes
04510 Focal adhesion
105014275
09142 Cell motility
04820 Cytoskeleton in muscle cells
105014275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105014275
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
els04147
]
105014275
00536 Glycosaminoglycan binding proteins [BR:
els00536
]
105014275
Membrane trafficking [BR:
els04131
]
Endocytosis
Phagocytosis
Opsonins
105014275
Exosome [BR:
els04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105014275
Exosomal proteins of colorectal cancer cells
105014275
Exosomal proteins of bladder cancer cells
105014275
Glycosaminoglycan binding proteins [BR:
els00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105014275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
105014275
NCBI-ProteinID:
XP_010874752
UniProt:
A0A3P8ZWH7
LinkDB
All DBs
Position
LG13:18384189..18399604
Genome browser
AA seq
955 aa
AA seq
DB search
MKERVGMGVWMRDMVLSLLMLQLARTVTAQGIVYDLLVSPDCLPDLTQGGLKNKGLDEAF
LLSSFSLQSKSPSHLYSIINPRTNSKYLEFTLQAKLNKVMIRYQRPDGRVATTSFNHPSL
ADGREHHVMVHASGLQRGPGSMAVYIDCRLAHIVDELPAVFGSLTPGPNKVALKTLKPTG
QDELTDLKLVIEDTIDNVATLQDCSFQKSESLGTIQLLGLQTGSQDSSQMLELKKMMSEM
KDLLLQQIKETAFLRNTISECLACGLSGNMESGPGTGTRTESGPSKCDPGVCFNQDMCIP
AEGGGFTCAPCPDGYTGDGVYCNDVNECTFDPCFLNVSCVNMAPGFRCERCPLGYSSPEI
SGVGVAYAKSHKQVCEDIDECQGPPDNGGCTSNSHCHNTVGSFRCGECKSGFSGDQVKGC
KGERLCGNGQPNPCDSNAQCVVERGGSISCQCDIGWAGNGYVCGKDTDIDAYPDDKLRCK
DSNCEKDNCVFVPNSGQEDADRDGLGDACDDDADSDGILNIQDNCWLHPNEDQKNSDKDL
HGDACDNCLTTENPDQRDTDQDGLGDNCDDDIDGDGMKNILDNCPSVPNPDQKDRDHDGV
GDICDSCPDMVNPAQSDVDHDLVGDTCDTNIDSDGDGHQNTKDNCPTVINSSQLDTDKDG
KGDECDDDDDNDGVLDEADNCRLVVNPDQKDEDNNGVGDACTGDFDQDKVIDRIDNCPEN
AEVTLTDFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFE
GTFHVNTLIDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAVPFRAVAEPGIQLKAVKSK
TGPGEYLRNSLWHTGDTADQVRLLWKDERNVGWKDKVSYRWFLQHRPQVGYIRVRFYEGP
NLVADSGVKIDTSMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDYQDYSTQNSE
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaacgtgtggggatgggggtgtggatgagagacatggtcctctctctgttgatg
ctgcagctggctaggactgtcacagctcaaggtattgtgtatgacctgctggtgtctcca
gactgcctgcctgacctgacacagggaggactgaagaacaaaggtctggacgaggccttc
cttctctcctctttcagtctccagagcaaatccccctctcatctgtacagcattatcaac
cccaggaccaacagcaagtatctggaattcaccctgcaggctaaactcaacaaggtgatg
atccgctaccagaggcctgatggtagggtggccaccactagttttaaccacccttctctg
gcggatggcagagagcaccatgtgatggtccatgccagcggtttgcagagaggaccaggt
agtatggctgtctacatagactgcaggctggctcacattgtggacgagctgcctgctgtc
tttggctcactgacccctggacccaacaaggtggcacttaagaccctgaagcccactgga
caggatgagttgaccgacctcaagctggtcatagaggacaccatagataatgttgctacg
ctacaggactgcagcttccagaagagtgagtctctgggaaccattcagctgctgggcctc
cagacaggcagtcaggattcgtctcagatgctggagcttaaaaagatgatgtcagagatg
aaggacctgctgctgcaacagattaaggagactgcgttcctcagaaacaccatctcagag
tgtctggcctgtggtttaagtggcaacatggagtcaggcccaggtactggtactcgtaca
gagtcaggtccatccaagtgtgatccaggtgtgtgtttcaatcaggacatgtgtatcccg
gccgagggaggaggcttcacctgcgccccctgtcctgatgggtacactggagatggggtt
tactgcaatgatgtgaacgagtgcacgtttgacccctgtttcctcaatgtgagctgtgtg
aacatggctcctgggttccgctgtgagagatgccctctgggatacagcagtcctgaaatc
agtggagtgggagtggcctacgcaaagtcccacaaacaggtttgtgaggacatcgatgaa
tgccagggtccccctgacaatggaggctgcaccagcaactctcactgccacaacactgtg
ggttcattccgctgcggagagtgcaagagtggcttctctggggaccaggtgaagggctgc
aaaggggagaggctctgtgggaacggccagcccaacccctgtgactcgaatgcacagtgt
gtagtggagaggggtgggagcatcagctgccagtgtgacataggatgggcaggtaacggc
tacgtgtgtgggaaagacacggacatcgatgcctaccctgatgacaagctcaggtgcaaa
gacagcaactgtgaaaaggacaactgtgtgtttgttcctaactctggtcaagaggatgca
gacagagatgggctcggcgacgcctgtgatgatgatgctgatagtgacggcatccttaac
atccaggataactgctggctgcatcctaatgaggaccagaagaacagcgataaggatctc
catggcgatgcgtgtgacaactgcttgacgacagagaacccggatcagcgggacacggac
caggatgggctaggagacaactgtgatgatgacatcgacggagacggcatgaagaatatt
ctagataactgcccgagtgtgcccaacccagaccaaaaggacagagaccacgatggggtg
ggagacatctgtgacagctgtcctgacatggtcaatcctgcccagtcagatgttgatcat
gacctcgtaggagacacatgtgacaccaacatagacagtgatggggacggtcatcagaac
accaaggacaactgtcccacggtcatcaactcctcccagctggacacagacaaggatgga
aagggagatgagtgtgacgatgatgacgacaacgatggggtcttggatgaagcagacaac
tgccggctggtggtgaaccccgaccagaaagatgaagacaataatggcgtgggtgatgct
tgtacaggggactttgaccaagacaaggtgattgacaggatagacaactgcccagagaat
gcggaggtcactctgactgacttcagagcatatcagacggtagtactggacccagagggc
gacgcccagattgatcccaactgggtggttctcaaccagggtatggagattgtccagact
atgaactctgaccctggcctcgctgtaggctacacagcgtttagtggggtggactttgaa
gggacgttccatgtgaacacgttgattgatgacgactatgcaggcttcatctttggctac
caggactcctcctccttctacgtggtcatgtggaaacagacagaacagacctactggcag
gcggtgcccttccgagctgtggcagagcctggcatacagctgaaggcagtgaagtctaag
acaggtccaggagagtacctgaggaactccttatggcatacaggagacactgccgaccag
gtccgcttgctgtggaaggatgagaggaacgttggctggaaggacaaggtgtcataccgc
tggtttctacagcacagaccacaggttggatacatcagggtgcgtttctacgagggtcct
aacttggtagcggactccggcgtgaaaatagataccagtatgcgaggagggagactgggc
gtcttctgtttctcccaggaaaacatcatctggtccaacctcaagtaccgttgcaacgac
accatccctgaagattaccaggactacagtacccagaactctgaataa
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