Esox lucius (northern pike): 105014698
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Entry
105014698 CDS
T04894
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
els
Esox lucius (northern pike)
Pathway
els03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105014698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
els03009
]
105014698
Ribosome biogenesis [BR:
els03009
]
Eukaryotic type
Pre-60S particles
RNases
105014698
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
BRCT_TopB1_SLF1
Motif
Other DBs
NCBI-GeneID:
105014698
NCBI-ProteinID:
XP_010875531
LinkDB
All DBs
Position
LG13:complement(2537412..2545345)
Genome browser
AA seq
1219 aa
AA seq
DB search
MLPSGGFFAHIDCPFFKRDLCQRPHCLYKHVKDNRGMFDSHQHGPSSVAGVSETYSTSVN
GVPPGNEAKDPCLLELERINKEIETVKNEVEKEQRRLSRYQTVQVDSEKKESKKALITKS
EMSGKDLNGNRVKSSQRQSATACSTARKKYVVDTSKPRTDLEYDPLSNFSSSLGSSCSEH
KPGSKKKGKGGQDVKTTMGLVCREDQTETELTVSPPGSDKLADDSDEEGVLIIDVPPLEN
DRKKIRAKKHCNPATNKLQDEKEKVHPVSSADPAVSGAPLATALTVSLPSPEDVQVLSLP
AASDAVKGDDVDACGLSSSSTSQEHEGKPSAEGVFDNLSKCLEMLRSESERIVCYKEAEA
TAESDCSQEPERPGMSVSYTGPVVREDVSLLMPEPGLPGSGLASNCVEKICLAQPSDVSH
GHASSLPDKVLAPPVSSPCELPFQTQRNEQQAEPSSAQSYWSPVQSSSSVPCLQKIPGQT
PDLDFPISEVPTQNFLEQAATSAGITHRPTTLETNGIELQSGAFEQLPKEAVSDQLVIDC
SSEELEYSELSDSDTMEECYRIFMEDENKCEGKSTEEAGTPVSAVDVEMPGLAVKPKLLP
GPRKRLAHVSKYTESSVAKTKAQVIVPFRGGTPQSSNPSKIQQLQQRASMLSAALKGGQA
FASANTQRKGVTMASSSHQATHQPNYQPTHQPTHPVQYLTHQLIHQPTQLIHQPTQLIHQ
PTQLIHQPTPHPTPMQNTCVNVIPVGTAIQVGNNLHFILPEGSYSLPISSASSPVTLACS
PIRSTINTPIIPVTPVSVQPQPTAYIPAKPIPTKRKARVRPEVGAKVPHDVRQRYVNLFV
EEFLKTSVTVQDAFEKALTEEKTVYDRSINKLKYLSVAVNALKRLKNQSTVSVKAGNKTD
VQISRGNIPLNTKALWGIGDAALYESLKEHILSEEVLTENNYPLQHPEQAGCAILYREDH
KKGITDSLKRICCRCGATYSVNQMGKHMRKEECNYHSGKGVENKVPGGVETRYSCCEGVV
GCPGCQVFQLHVHDAVSLDNFVTTLPKPVTDTACPGVFSVDCEMCYTTLGLELARVTVVN
SSLQVVYDTFVKPANEVIDYNTRFSGISEDDIRGASTSIQDVQETLLSFVSAETILIGHG
LEADLCALKLFHGTVVDTSVSFPHRLGLPHKMTLHSLTADYLRRILQESVGGHDSAQDAT
ACMELMLWKVKEEGKTKRW
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttccggtgggtttttcgcacatatagactgtccattttttaaacgcgatctc
tgtcagcggccccactgtctgtacaagcatgtcaaagacaaccgaggaatgtttgacagc
caccagcatggaccatcatcagtggcaggtgttagtgaaacatattccacttcggttaat
ggagtcccaccgggcaatgaggcaaaagacccttgccttttggagttggaaaggatcaac
aaagaaattgagacagtgaagaatgaggtagagaaggagcaaaggagattatcccgctat
caaactgtccaggtggacagtgaaaaaaaagagtccaagaaagccttgattaccaaatct
gaaatgtcaggaaaagatctgaacggaaatagagtcaaatcttcccaaaggcagtccgcc
acagcctgttctactgctaggaagaagtatgtggttgacacctccaaacccaggaccgat
ttggaatatgatcctttatccaacttctcttcttctttgggatctagctgttctgagcat
aaaccaggtagcaagaagaaagggaaaggtgggcaagatgtgaagacgacaatggggctt
gtttgtagggaggaccagactgagacagagctcactgtatcaccgcctggtagtgacaaa
ctagcggatgactctgacgaagaaggggtcctcatcattgatgttccacccctggagaac
gataggaagaagattagagctaagaagcactgtaaccccgccaccaacaaactacaggac
gagaaagaaaaagttcacccggtttcttccgctgaccctgctgtgtctggggctccgctg
gctactgctcttacagtgtctcttcctagtcctgaagatgtccaagtgttatccctgcct
gctgcgtctgatgctgtgaaaggtgatgacgtcgatgcttgtggcctatccagtagttcc
accagtcaggaacacgaaggtaaaccgagtgccgagggcgtctttgacaacttgtccaaa
tgcttggaaatgcttagaagtgaaagcgagagaatagtttgttacaaagaggctgaggcc
actgctgaaagtgactgtagccaagaacccgagcgtcccggaatgagtgtgtcatacact
ggtccagttgttagggaagatgtcagcttattgatgccagagcctggattacctggaagt
gggcttgcctccaactgtgttgagaaaatctgtcttgctcaacccagtgacgtctcacac
ggacatgcatcttcactgcctgataaggttttagcacctcctgtctcctcgccctgtgaa
ctcccctttcagacccagagaaatgagcagcaggcagaaccgagctcggctcagagttac
tggtcacctgtgcaaagttcatcgtcagtgccgtgtcttcagaaaataccgggccaaaca
ccagatcttgattttcccatctctgaagttccgacacagaactttctagagcaagcagcc
acttctgctggtatcactcataggccgactacactagagactaatggaatagaactgcaa
tcgggtgcttttgaacaacttcccaaggaagcagtgtctgatcaactggttattgactgt
agttctgaggagctagagtattctgagctgtctgatagtgacacaatggaggaatgctac
cgtatattcatggaggatgagaacaagtgtgaagggaaatctacagaagaggctggtaca
cctgtaagtgctgtggatgtggagatgccagggctagcagtgaaacccaaattgttgcct
ggacccaggaaaaggttggcccatgtttccaagtatactgagtcatcggtggccaaaacc
aaagctcaggtgatcgttcccttcagaggaggaaccccccagtcgtccaacccctcgaag
atccagcagctgcagcagagggcctccatgttgtcagctgctctgaaaggaggccaagcg
tttgcctcggcaaatacgcagaggaaaggggtgaccatggcttcttcgtctcatcaagcc
actcatcaaccaaattatcagcccactcatcagcccactcatccagttcagtacctcact
catcaactcatccaccagcccactcaactcatccatcagcccactcaactcatccatcag
ccaactcaactcatccatcagcccactccccaccctactcctatgcagaacacttgtgta
aacgtcatacctgtgggaacagccatccaggtgggcaataacctgcacttcatccttcca
gagggaagctactctctgcccatcagttcagctagttctccagtcaccttagcctgttcc
ccgatccgttccacaatcaatacgccaatcataccagttacccctgtttctgtacaacct
cagcctactgcctatatccctgcaaaacccattcccaccaagcgtaaagccagggttcgt
cctgaggttggtgccaaagtgccacacgacgtacggcagcgctatgtaaacctgtttgtt
gaggaattcctaaaaacgtctgtcactgtacaagatgcttttgaaaaggccctcacggag
gagaagactgtgtatgatcgcagcattaacaaacttaagtatctgagtgttgcagtaaat
gcgctgaagaggctgaagaaccagagcacagtctctgtcaaagctggaaataaaactgat
gtacagatatccagaggaaacattccactcaataccaaagctctttggggaattggggat
gctgcattgtatgaaagtttgaaggagcacattctgtcagaggaagtattgaccgagaat
aactatccccttcagcacccagaacaagcaggctgtgccatactgtatcgtgaagatcat
aagaagggaatcactgattcgctgaagagaatttgctgtcggtgtggggccacttactct
gtgaaccaaatgggaaagcacatgcgcaaggaggagtgcaactaccactctggaaaagga
gtcgagaataaagtaccgggtggagtggaaacgcgctacagctgctgcgagggtgtggtt
ggatgtccgggctgccaagttttccagttgcacgtgcacgatgcagtgagcctggacaac
tttgtcacgacccttcctaaacctgtgacggacacggcctgcccaggggtgttctcggtt
gactgtgaaatgtgctataccactctgggtctggagctggccagggtgactgttgttaac
tccagtttgcaggtggtctatgacacttttgtgaaaccggctaatgaagtgattgactac
aacaccagattctcaggtattagtgaagatgacataaggggggcaagcacgtccatccaa
gatgttcaggagactcttttgagctttgtcagtgcagagaccatactgattggccatggc
ttggaagccgacctctgtgccctgaagctgttccatggcaccgtggtggacacctctgtg
tccttcccccaccgcctgggcctgcctcataagatgaccctccacagtctcacggcagac
tacctcaggaggatcctccaggagagtgtggggggccatgactctgcacaggatgcaact
gcctgtatggagctcatgctgtggaaggtcaaagaagaaggcaaaactaaacgatggtga
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