Esox lucius (northern pike): 105015018
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Entry
105015018 CDS
T04894
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
els03009
]
105015018 (ddx54)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105015018 (ddx54)
Ribosome biogenesis [BR:
els03009
]
Eukaryotic type
Pre-60S particles
Helicases
105015018 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
DNA_pol3_chi
DRTGG
Motif
Other DBs
NCBI-GeneID:
105015018
NCBI-ProteinID:
XP_010876115
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All DBs
Position
LG14:complement(18899017..18908193)
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AA seq
876 aa
AA seq
DB search
MAQRKKKLTKKKRHTGHRDPDDSDGGDFEVAATIRDDDSAGTKLPRFPVASTECQSDVEP
DTRELVRAQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVAM
ARTGSGKTAAFLVPMFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGKFTGLKTAL
ILGGDRMDDQFAALHENPDIIIGTPGRLMHVVMDMNLKLQSVEYVVFDEADRLFEMGFAD
QLQEIIRRLPDNRQTLLFSATLPKLLVEFARAGLTEPVLIRLDLDSKLSELLKLGFFHLR
MDDKPALLLHLLRNVVKPQEQTVVFVATKHHVEYLKELLTSEGIECAYIYSALDQTARKI
NIGKFVHRKAMVLIVTDVAARGIDIPLLDNVINYNFPSKAKLFLHRVGRVARAGRSGASY
SLVCTDEIPFLYDLHLFLGRPLQLATPEHHPDSDGVFGRVPQSILDDEESQLITAHETSD
DLQNLRRIADNAYKQYIKSRPMPSPESIKRVKNTELPGMAVHPLLGSGLEKMELERLQMV
DCIKGYKARATIFEINSNSKTNASVVMRAKRSRDSRLVDKFTHKRGIQAAEGSCHVPVTP
LPSMHHMAGQEDSEEEDLQGVFSEVVGGKRRKHHGDGENERPDSKKTKRTGRDEENYIPY
RPKDFNSERGLTLGAEGTAFEQQASTAVLDLMGDEGERLNQHKHMMKWDRKRKRFVKESG
KEADKKNKIRTESGQMVNNKNKKNFYEEWKKKYKVDEGGGGDSDEETRGGGRHRGGGRGR
GWHGRGRGGPSRGPNHTPLGPPGHQRSGSTGSRGPRSELKSRDQILKQRKKTEKQRFLQS
GGLKKLRTKGKQSLKDQSRSGFGRGVHKKGKMKKRL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagaaagaagaagctgacgaagaaaaagagacacactgggcaccgggaccct
gacgactcggacggtggtgacttcgaagttgctgctacaattcgggatgacgattctgct
gggacaaagttaccccggttcccagttgcttcaacagagtgtcagtctgatgtggaacca
gacaccagggagctggtcagagctcagaataagaagaaaaagaagtccgggggattccag
tccatgggtctcagttaccctgtttttaaaggggtcatgaagaagggctacaaagtccct
actccaatccagagaaagactatcccagtcattctagatggcaaggacgtggttgccatg
gccaggacaggcagtggaaagacagcggcgttcttggtgcccatgtttgaaaagctgaag
gccccccaggcccagacgggggccagggctctcattctgacccccaccagggaattggct
ctacaaaccatgaagttcaccaaggagttgggaaaatttactggccttaagacagcttta
atccttggtggagaccggatggatgatcagtttgctgcacttcatgaaaacccagacata
atcattggtaccccaggtcgtctgatgcatgtggtcatggatatgaacttgaagctacag
agtgtggaatacgtcgtgtttgatgaggctgacaggctctttgagatgggctttgctgac
cagctccaagagatcatccggaggctcccagacaacagacagaccctgttgttctctgcc
accctgcccaaactgctggtggagtttgctagagctgggttgactgagccagtactgatt
cgtctggacctggacagcaagctgagtgagctgctgaagttgggattcttccacctgagg
atggatgacaagccagctctgctgcttcaccttctaaggaatgtggtgaagccccaggag
cagacagtggtttttgttgccaccaaacaccatgtggagtacctcaaagagctactgacc
tctgagggcattgagtgcgcctacatatacagcgctctggaccagactgccaggaagatc
aacattggtaaatttgttcaccgcaaggccatggtattgatcgtgacagacgtggctgct
cgcggcatagacatccccctgctggacaacgtcattaactacaacttcccctcaaaagcc
aagctcttcctgcacagagttggtcgagttgcgcgagcaggccggagtggcgcctcctac
agccttgtgtgtacagacgagataccgtttctctatgaccttcatctcttcctggggaga
ccccttcagctggccacgcccgagcaccatccagattcagacggtgtgtttggtcgggtt
cctcagagcatcctggatgatgaggagtcccagctgatcacagcccatgagacctctgat
gacctgcagaacctgcgtcgcattgcggacaacgcctacaagcagtacatcaagtcccgt
cccatgccctcgccagagtccatcaaacgtgtgaagaacacagagctccccggcatggct
gtccaccctctgctagggtctggcttggagaaaatggaactggagcgccttcaaatggtg
gactgcattaagggctacaaggctcgtgctaccatctttgagatcaactccaacagcaag
accaatgccagcgtggtgatgcgagccaagcgctccagggactcgcggctcgtggacaaa
ttcacacacaagagaggaattcaggctgcagagggcagctgtcatgttcctgttactcct
ctgccctccatgcaccacatggccggccaggaggacagcgaagaggaggaccttcaggga
gtgttctctgaggtggtgggggggaagaggaggaaacaccatggggatggggagaatgaa
aggccagacagcaagaaaaccaaacggactggtcgcgatgaggagaactacatcccttac
agacccaaagacttcaactctgagaggggactgactctgggggctgaaggaaccgcgttc
gagcagcaagcttccactgctgttctggacctaatgggagatgaaggggaaagactcaat
cagcacaaacacatgatgaagtgggatcgcaagagaaagcgttttgtcaaagaatctggg
aaggaagccgacaagaagaataagataagaacggagagtggacagatggtcaacaacaaa
aacaagaagaacttctatgaggagtggaagaagaagtacaaggtggatgaaggagggggt
ggtgattctgatgaagagactcgaggtggaggcagacacaggggaggcggccgaggacga
ggctggcatggccgtggccgaggtggcccatccaggggccccaaccatacgcccctgggt
cccccaggacatcagaggagtggtagcacaggctcccggggcccgcggtcagaactgaag
agccgtgaccagatcctgaagcagcgcaagaagacagagaaacagagattcctgcagagc
ggaggcttgaagaaactccggaccaagggcaagcagagcctcaaagatcaaagcaggtct
ggctttggccgaggtgtccacaagaagggcaagatgaagaagagactgtaa
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