Esox lucius (northern pike): 105015065
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Entry
105015065 CDS
T04894
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X4
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105015065
Enzymes [BR:
els01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105015065
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105015065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
RING_XB3-XBAT31
FYVE
zf-C3HC4_4
Prok-RING_4
zf-rbx1
Baculo_IE-1
C1_2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
105015065
NCBI-ProteinID:
XP_010876212
LinkDB
All DBs
Position
LG14:17745523..17753740
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AA seq
439 aa
AA seq
DB search
MHLSKSRVDQDCSRSIHVATAPKMGGRRGQCCLKGAPGGAGQVSGPDKPEAGDDYLVGSP
LCCTPVSRFNTASLPVTTRLDPFYQTRDISANQSVPLSTSRIPSHRRSVARGTLEPSCSS
ESRTGPVDGNERGTEHMAHAPVGSYTLPLIGATGRLPTCTSRLTREGPALLSSEQQTHVE
SSGESVQLGDLPPGSTPFVVRGPGVSLITEEEVDEEGRGRTPSEPGQAQAVVPQCFSKRE
KNRLKSQRRKRRKKELWLNSQVQSLTGMRTESEEEDREAYTCAVCLDVYFSPYSCQPCGH
IFCEPCLRTLAKNRPTNTPCPLCRTLISQTLFQKELNQTAKAFFPVIYHSRKHNFQNSKC
AKWPLPSCRKQFPVFWGYQRQAALGRRWYFPQAGFTMDALDLADMRAWLFDIDLVLIYIQ
SVNWIPTLLVLCFLLYYFS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcagcaagagtagggtcgaccaggactgcagtcgttccattcatgtggccaca
gcaccgaagatgggaggtaggagaggacagtgctgcctgaagggcgccccagggggtgca
ggccaagtcagtgggccggacaagccagaggctggggatgactatctcgttggctcaccg
ctttgctgtacccctgtgtcccgttttaacacggcgagcctaccagtcacaacacgccta
gatcccttttaccagaccagagacatctcagccaaccaatcagttccgttgagcacctcc
agaattccttctcataggaggtctgttgcgaggggcacgttggaaccctcctgtagctct
gagtcccggacaggccctgtagatgggaatgagagagggacagagcacatggcccatgca
cctgttgggtcctacacccttcctctaattggtgctactggtaggttacctacttgcacg
tcacgtctgactagggagggtcctgcactgcttagctcagagcaacagacgcatgttgaa
tcatcaggagagtcagtgcagctgggagatctgccccctggttctactcctttcgtagtg
agagggccaggtgtctccctcatcactgaggaggaggtggatgaagagggtagagggaga
accccctcagaacctggtcaggcccaggcagtagtcccacaatgcttcagcaagagagag
aagaaccggctgaagagccaaaggaggaaacggaggaagaaggagctttggcttaactcc
caggtacagagtctgacagggatgcggacagagagcgaggaggaggacagagaggcctac
acctgcgctgtgtgcctagatgtctacttcagcccctatagctgtcagccctgtggccac
atcttctgtgagccttgcctccgcacgctagccaagaacaggcccaccaacaccccctgt
cctctctgccgcaccctgatctcacaaactctcttccagaaagagctcaaccagacagct
aaggccttttttccagtgatctaccattcccgaaagcacaactttcagaattccaaatgt
gctaaatggccacttcccagctgtcgaaaacaattcccagttttttgggggtaccagagg
caggcggctctagggaggcggtggtactttccccaagcaggcttcacgatggatgccctg
gaccttgccgacatgagagcatggctctttgacattgacctggtcctcatatatatccag
tctgtcaactggataccaaccctgctggtgctttgcttcctattatactacttctcttga
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