Esox lucius (northern pike): 105015129
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Entry
105015129 CDS
T04894
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
els
Esox lucius (northern pike)
Pathway
els03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105015129 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
els03009
]
105015129 (efl1)
Ribosome biogenesis [BR:
els03009
]
Eukaryotic type
Pre-60S particles
GTPases
105015129 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
105015129
NCBI-ProteinID:
XP_012993228
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All DBs
Position
LG02:complement(10600415..10662961)
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AA seq
1150 aa
AA seq
DB search
MGHTTLDKIKALQKNPANIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYASEEKDYLINLIDSPGHVDFSSEVSTAVRLCDGAIIMVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKMDRLIMELKFTSQEAYTHLQKILEQVNAVTGSL
FTSKVLEERADKEKEKDKEKEKEDIDPMGCSGSEQVYDWSAGLEDSDDSQLYFSPDQGNV
VFASATDGWGFSIQQFANIYSQKMGIRGEVLRKTLWGDFYLHAKAKKIMKGAHTKGKKPL
FVQLVLDNIWSLYDAVVTRRDQDKVEKMMLSLGVKVMARDSRHSDPKVLLSAICGQWLPV
SQAVLSMVCEKLPSPLDMTSERIEKLMSVGARRFDSLPTQTQELKTAFMQCSCEDTAPVI
VFVSKMITVDAKSLPQNKQRPLTQEEITQRRELARQRHAERQATSQQTGNEEGNAHAGST
APAHSPGDNSIGSQAVLSQMQALTVAAKPEDEGKQIFVAFARVYSGVVRRGQRVFVLGPK
YNPAQGLRVLPEGSTSMTGSLPPVPHLACCTLDSLYLLMGRELEDLEEVPPGNVLGIGGL
EECVLKSATLSTSPALPPFIPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCAE
VLIQETGEHVLVTAGEVHLQRCLDDLRERFAKIKISVSKPIIPFRETVVKPPKVDMVNED
LGKQQKVAVIHQVKESDTLHLDPSGLVTLTTPNRQATVGVRAVPLPEEVPLLLEGSADLI
RTLEQAGQAQRDGRFLDMSPRTHDALLGLKSKLEGLLQGRKWRNAVDRIWAFGPRRHGPN
ILLNSVEGYQRPSVWHCLERDKGEKDGDNAIRDFDNSIVSGFQLATLSGPMCEEPLMGVC
FSVERWEMNFPIQRTHLDSVGDEDSNSHDAPASSSESPADTAGQPEGRGEAGRVCETAQA
EGAVARPSQQRRHEDIGAGVVDCYGPFSGQLIAAVKEACRHAFQAKPQRLMAAMYTCEIM
ATAEVLGRVYGVLGKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASP
QLVFSHWEVIGSDPFWVPTTEEEYLHFGEKADSANQALKYMNAVRRRKGLYVEEKIVEHG
EKQRTLGKNK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgggacacacgactttggataagattaaagcactacagaagaatcctgccaatatcagg
aacctctgcattctagctcatgtggaccatggcaaaacaacactggctgattgcttggtg
gcaagcaatggcattatatcaagtcgcttagctggaaagctgaggtacctggacagccga
gaggatgagcagatccggggaattacaatgaagtccagcgcgatctcactgcactacgct
tcggaggagaaggactacctgataaacttgatcgactctccgggccatgtcgacttctcc
tctgaggtgtccaccgctgttagactgtgtgacggggccatcatcatggtagatgctgtg
gagggagtctgtccgcagacccaggcagtgctacgtcaggcgtggctggaaaacatcagg
ccagtgctggtgattaacaagatggaccgactcatcatggagctcaagttcacctctcag
gaagcctacacacacctgcagaagattttagaacaggtgaatgcagtgactggctctctg
ttcacatccaaagtgctggaggagcgggcagataaggagaaggagaaggacaaggagaag
gagaaggaggacattgatccaatggggtgctcggggtcagagcaggtttatgactggagt
gccgggctggaagattcagacgactcccagctgtacttctctccagaccaggggaatgtt
gtctttgccagtgccacagatgggtggggcttcagcatccagcagtttgccaatatctac
agccagaagatgggcatcagaggtgaggtgctacgaaagaccctctggggagacttctac
ctccacgctaaagccaagaagattatgaagggagctcatacaaagggaaagaagcctctt
tttgttcagcttgtgctggacaacatctggagtttatatgatgctgttgtcacccgacga
gaccaggataaggtggagaagatgatgttgtcgctgggtgtaaaagtgatggccagggac
tcccgtcactccgaccccaaagtcctcctctctgccatctgcggccagtggctgcccgtc
tcacaagcagtcctctccatggtgtgtgagaagctccccagtccactggacatgacctcc
gagaggatcgagaaactgatgagtgtgggagcgcgtaggttcgactcacttcccacacag
acccaggagctgaagacagccttcatgcagtgttcctgtgaggacacagccccggtcatt
gtctttgtgtccaagatgattacggtggacgccaagtccttacctcagaacaaacagagg
cctctgacccaggaggagatcacccagcgccgggagctggccagacagagacatgctgag
agacaggccaccagtcaacagacgggtaacgaggagggaaatgcccacgcaggaagtaca
gccccagcacatagtcctggtgacaacagtataggtagccaggctgtcttgagccaaatg
caggccctgactgtggcagctaaaccagaggacgaggggaagcagatatttgttgccttt
gccagagtctacagcggtgtggttcggaggggtcagagggtgtttgtgcttgggcccaag
tacaaccctgcacaaggcctacgcgtgctcccagagggcagtaccagcatgactggctct
cttccacctgttcctcacctggcctgctgcaccctagacagcctgtacctgctgatgggc
cgggagctggaggatctagaagaggtgccgccaggaaacgtgctgggtattggcggactg
gaggagtgtgtgttgaagtctgcgaccctgtcaacttcccccgcactgccacccttcatc
ccactgaactttgaggcgacacccattgttcgagtggccattgaacccaaacacccaagt
gagatgcctaaattggtgcgcggtatgaggctactgaaccaggctgacccatgtgccgag
gttctgatccaggagacaggagaacatgttctggttaccgctggagaggttcacctgcag
cgttgtctggatgacctcagagagaggtttgccaagatcaagatcagtgtgtccaagccc
atcatcccttttagagagactgtggttaaaccgcccaaagtggacatggtcaatgaagac
cttgggaaacaacagaaggtggctgttatacaccaggtgaaagagtcggacaccctgcac
ctggaccccagtggcctggtcaccctcaccacccccaacagacaggccacggtgggggta
agggccgtacccctacctgaagaggtgcctcttctcctggaagggagtgccgacttgatc
cggaccctggagcaggcgggtcaggcccagagggatgggaggttcctggacatgagtccc
cggacccatgatgctcttctgggactgaagagcaagctggagggtctgctgcaagggagg
aaatggaggaacgcagtggaccggatatgggcctttggaccacgcaggcatggaccaaac
atcctactgaacagtgtggaggggtaccagagaccgtctgtgtggcactgcctggaacga
gacaaaggggagaaagacggggacaatgctattcgagactttgacaacagcattgtcagc
ggtttccagctcgccaccctctccggacccatgtgtgaggagccgctcatgggcgtctgt
ttctcagtggagagatgggagatgaacttccccatccagcgcacccacctggactccgtg
ggcgatgaagactccaactcccacgatgcaccagcatcctcttccgaaagccctgccgat
actgcaggtcagccggagggccggggcgaggcaggcagagtgtgtgaaacggcgcaggca
gagggtgccgtggccaggcccagccagcagaggcggcatgaggacatcggggctggggtc
gtggactgttacggaccgttctctggccagctgatcgctgctgtgaaggaggcttgtcga
cacgcattccaggccaaacctcagagactcatggctgctatgtatacctgcgagatcatg
gctacagcagaggtgctaggtcgtgtgtacggggtcctggggaaaagagagggccgggtg
ttacaagaggagatgaaggaggggacagacatgttcatcatcaaggcagttcttcctgtg
gctgaaagcttcggatttgctgatgagatacgcaagaggaccagcggattggctagtccc
caactggtcttcagccactgggaggtgatcggcagtgatcccttctgggtccctaccaca
gaggaggagtacctccacttcggagagaaggcagattcagccaatcaggccctgaaatat
atgaacgctgtccgccgacgcaaaggactctacgttgaggagaagattgttgagcacggt
gagaaacagagaacactcgggaagaacaaatag
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