Esox lucius (northern pike): 105015244
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Entry
105015244 CDS
T04894
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
els
Esox lucius (northern pike)
Pathway
els04510
Focal adhesion
els04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105015244 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105015244 (lamc3)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
FlaF
Motif
Other DBs
NCBI-GeneID:
105015244
NCBI-ProteinID:
XP_010876552
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Position
LG14:complement(11698869..11811399)
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AA seq
1642 aa
AA seq
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MDTPLTTPLVLLLLRFLLTIHGAMDSCYDDHEDSPSRCMPKFENAAFNRTAIASNVCGSP
PEEYCMQTGSTRSYHRCSVSEPALSHNASLLTDFHTDEEPTWWQSQSMFYGVQHPNSVNL
TLHLGKAYEITYVRLKFYTSRPESFAIYKRTREDGPWIPYQYYSASCSKTYGKNAKGYIR
PGEDERVALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSTVLQDWVTATDLLISLDR
LNTFGDEFFKDSKVLRSYYYAISDYSVGARCKCNGHGSECVLDEQGALVCHCQHHTVGVD
CQKCHPFYQDRPWGRATGDTANQCIKCNCSGRSDACVFDAEQYRATGSGGRCVNCRDHTD
GPHCERCLENHHRRSPLDPCRPCDCNILGSVTLQCDAEGRCRCRASVTGDKCDACQPGFH
SLGPGGCRPCDCDPRGSVGVCSASDGGCHCKPNVEGQSCDRCKPGSFNLQENSPAGCMSC
FCSGHSLACRSSDYHAAVDITTDFLEDADGWSGQFSGGQEYPLLWKEGEVYLLPLSEDDP
GFYTAPAKFLGNQLMSYDQLLSLTFAAEAQYLLPHSVTVLLEGSGTTLSAHLSPHPGPVL
HLGLVPQQTFALRLHEDETRLRPSLSSLEFRRLLFNLTALRISNAGGHNYTSQLSGVTLA
SAAASSSPVTPSPLAAPWVEVCLCPPGYGGQFCELCAPGFTREVPNGGPLSPCVPCSCHH
HGPCHPETGVCECSDFTTGPTCTRCLDGYYGNPLIGTTNDCQPCPCPDRTSCAQITETGD
VVCTNCPPGQRGTRCEMCEDGFHGDPQGRSGPVRPCQRCNCNGNVDPNALGVCDHMTGRC
LKCLGNTEGDYCQRCRPGYYGDALNHTVAQKCKPCSCSPYGTSGSLEECDPYTGRCPCLS
HVTGRNCGQCEVGFFNLQPGVGCERCNCNPIGSSSMACHPITGQCMCRPGVEGRLCSICR
MGFFGFSTRGCRACNCDPMGSSSMQCHTNGSCPCRQGFVGYKCDQCELNFFHNRATHQCE
ECPVCYGLVKEQAGRLKARLQDLEKLLARFDCRTDYGRQYHMHQLHERQRHKRGHQGEDS
LPNALEDFLAIQEAKEAFVRRFALLEVSTHSLSAQLNTVTTALNCSVSEEVQPEEEVGDK
EGWGTLCRGLAGSVAVVTRARTQLKQATLDLDNMVVPFEVPPVPNRWNWAVNESEVLMKS
HTEMSGHIESIAAKAFMVSNQTYSLLMDLLEDNSTEEYISNLTKQLADMKQMKENLTAQV
NETLANRLALEEESAEVRNALGELTSSLLELSQRPNPTSGTNRSDPGLGLGTNRTEFGQP
ALGSEVVHLNNRTAELALHVQSTEELVSKIREEMEPRLLTAQKNMAAGEDIYKLTAKAKM
SKVMALSSVVTGKTVESEVIALWRELEGMQREWPHKQAQTKTALKKEKQLRGKVLEDIHK
KLNQTERVLKPALANVTHSKATTEQAERTAHVLSKEAKVTLTRAKHMRKASTQLTSSVDT
SLHQLSEMENHTAQAHAKLRTEPVESLVNVKGNIEAAKRQLEMYSLTLTQLISKIDSSEA
LERFERILTDTAVRLAVLRGSVESPALSGKIQTLRSAAQDQASQLTDLEQDLQEIRQERD
SLKDIALHLPQSCPQASGTEGK
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggataccccactgaccaccccgttagtcctcctcctcctccgctttctcctcaccatt
cacggggccatggactcctgctacgacgaccacgaggactccccaagccgctgcatgccc
aagttcgagaacgccgccttcaaccgcaccgccattgcgtcgaacgtgtgcggttctccg
ccggaggagtactgcatgcagaccggctcaactcggtcctaccaccgatgtagcgtgtca
gagccggccctcagccacaacgccagcctgctgacagacttccacacggacgaggagccc
acctggtggcaaagccagtccatgttctatggagtccagcacccaaactctgtcaacctc
accctgcacctgggtaaagcctatgagattacctacgtgcggctcaagttttataccagc
cgaccggagagctttgccatctacaagcgcacgcgtgaggatggaccatggataccctac
cagtactacagcgcttcctgtagcaagacctatgggaagaatgcgaaggggtacatccgc
ccaggggaggacgagagggtggcattgtgcaccgacgagttcagcgacatctccccactg
accgggggcaatgtggccttctccaccctcgagggacgacccagcgcatacaactttgac
cagagcactgtgctacaggactgggtgacagccactgacctgctcatctccctggaccgg
ctcaacacattcggagacgagttcttcaaggattccaaggtgctgcggtcctactactat
gccatctccgactactctgttggtgccaggtgtaagtgcaacggtcatggcagtgaatgt
gtgttggatgagcagggggctctggtgtgtcattgccagcatcacactgtcggggtcgac
tgccagaagtgccacccattctaccaggacaggccttggggcagagccacaggagacact
gccaaccagtgtatcaagtgtaactgcagtgggcggtcagatgcgtgtgtgttcgacgcg
gagcagtaccgcgccacgggcagcggggggcgctgtgtgaactgcagggaccacactgat
ggaccgcactgtgaacgctgccttgagaaccaccaccggcggtcgccgctggatccctgc
aggccttgtgactgcaacatcctgggctccgtgactctgcagtgtgatgccgaggggagg
tgtaggtgcagggcgagtgtgacaggagacaaatgtgacgcctgtcaacccggcttccac
tccctcggccctggcggctgcaggccgtgtgactgtgaccccaggggcagtgtgggggtc
tgctcggcgtcagacggtggctgccactgcaagcctaatgtggagggacagtcgtgcgac
aggtgcaagcctggctccttcaacctgcaggagaacagtccagctggctgcatgtcttgt
ttctgttccggacactcattggcctgccgctcctccgattaccatgcagctgtcgacatc
acgactgacttccttgaggatgcagatggctggtcaggccagttctccgggggacaggag
tacccactgctgtggaaggaaggagaggtctacctgctacccctcagtgaagatgaccct
ggcttctacacagctccagcgaagttcctggggaaccagctcatgagctatgaccagctc
ctctccctgacgttcgccgctgaggcccagtacctcctccctcacagtgtcacagttctc
ctggagggatctggtaccaccctgtctgctcatctatcaccccaccctggacctgttctc
catctgggcctggttccccaacaaaccttcgctctgagactgcacgaggatgagacgagg
ctgaggccttctctgtcttccttggagttccgccgtcttctcttcaacctcaccgccctc
aggatcagcaacgcagggggacacaactacacttcccaactctcaggggtaacgctggcc
tcggctgccgcctcctccagccctgtcaccccgtcccccctggcagctccctgggtggag
gtgtgtctgtgccccccagggtatggtggtcagttctgtgagctgtgtgccccagggttc
accagagaggtacctaacggaggacctctgtcaccctgtgtgccttgctcctgccaccac
cacgggccttgccatcctgagactggtgtgtgtgaatgttccgatttcaccacaggacct
acctgtacgcgctgcctggatggttactacggcaacccgttgattggcacgaccaatgat
tgccagccttgcccttgcccggaccgtaccagctgtgctcaaattacagagacaggggat
gtggtctgtaccaactgcccacctggacagaggggcaccaggtgtgagatgtgcgaggat
ggtttccatggcgatccccagggccggtcagggccagttcggccctgccagcgatgcaac
tgtaacgggaacgtggaccccaacgccctgggtgtgtgtgatcacatgacgggccggtgc
ctgaagtgcctgggaaacactgagggagactactgccaacgctgtcggcctgggtactat
ggagacgccctgaaccacacagtagcccagaagtgcaaaccctgcagctgcagtccttac
gggacttctgggtcattggaggaatgtgacccctatacaggacgttgtccatgcctcagt
catgtgaccgggcgaaactgtggccagtgtgaggtggggtttttcaacctgcaacctgga
gtaggctgtgagagatgcaactgtaaccccattggctcatcatctatggcgtgccatcca
atcacaggccagtgtatgtgtcggccgggagtggagggccggctgtgcagcatatgtcga
atgggcttttttggtttctcaacacgaggctgcagagcctgtaactgcgacccgatgggt
tccagctctatgcagtgccacaccaacgggtcttgtccctgccgccagggctttgtgggg
tacaagtgtgaccagtgtgagctcaacttcttccacaacagagccacacaccagtgtgaa
gagtgtcccgtctgctatgggctagtcaaagagcaggctgggagactgaaggctcggctg
caggatttggagaagctcctggcacgttttgactgtcggactgattacgggcggcagtat
cacatgcaccagcttcacgagcgccagcgtcacaagcgcgggcatcagggggaagacagt
ctgcccaatgcactggaggacttcctggccatacaagaagcgaaggaagcatttgtcaga
cggtttgctctcctggaggtttcaacgcactctttatcagcccagctaaacactgttacc
acagcattgaactgtagcgtcagcgaggaggtacagccggaggaggaggtgggggacaag
gaggggtgggggacgttgtgtaggggcctcgctggctctgtggctgtggtaacaagggca
aggacacagctgaagcaggcaacactggacctagataatatggttgttccctttgaggtg
ccacctgtgcccaaccgctggaactgggctgttaacgagtcagaggttctgatgaaaagt
cacacagagatgtctggtcacatagagtccatagccgccaaggctttcatggtctccaac
caaacctactctctcttgatggatctactggaggacaactctacagaggaatacatcagc
aacctcacaaagcaactggctgacatgaaacagatgaaggagaatctgacagcccaggtg
aatgagactctagccaatcgactggctcttgaggaggagtctgctgaggtccgtaatgcc
cttggtgagctcacctcctcgctactggagctgtcccagaggcccaacccgacatcaggt
accaatcggtcagaccccggccttggactgggtaccaaccgcacggagtttggtcagccg
gcactagggtcagaggttgttcacctgaacaacaggacagctgagctggcacttcacgtg
cagtctacagaggagctagttagcaagatccgagaggagatggagcctcggttactcacc
gcccaaaagaatatggctgctggagaggacatctataagctgacagctaaagccaagatg
tcaaaggtcatggccctgtcgtcagtggtgacggggaaaacagtggagtcagaggtcatc
gccctgtggagggaactggaaggcatgcagagagagtggcctcacaagcaggcccagacc
aaaactgctctaaaaaaggagaagcagctgagaggaaaggttctagaagacatccataag
aagctgaatcagacagagagggtcctgaagcctgccctggctaatgttacacactccaaa
gccaccacggaacaggctgaacgaacagcgcatgtcctgtctaaagaggccaaggtcact
ctgacccgggccaagcacatgaggaaagcgtccacccagctgacctcctctgtggacacg
agccttcatcagctgtctgagatggagaaccacactgcccaggcacacgccaaactgcgc
acagagcctgtagagtctctggtcaatgtcaaggggaacatcgaggcagctaaacgtcag
ctagaaatgtactcactcacactaacccagctcatcagcaaaatagatagtagtgaagcg
ctggagcggtttgaacgcatcctgactgacacagcagtgcgtttggctgttctccgtggc
agtgtggagagcccagccctgagtgggaaaatccagacgctccggtcagcagcgcaggac
caggcaagccagctgaccgatctggaacaggacctgcaggagatccgacaggagagagac
agtctgaaggacatcgccctgcacctgccccaaagctgtccccaggcctcagggacagag
gggaagtag
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