Esox lucius (northern pike): 105015393
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Entry
105015393 CDS
T04894
Symbol
thsd4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
els
Esox lucius (northern pike)
Pathway
els04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105015393 (thsd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
els04990
]
105015393 (thsd4)
Domain-containing proteins not elsewhere classified [BR:
els04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
105015393 (thsd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
105015393
NCBI-ProteinID:
XP_010876823
UniProt:
A0A3P8XRH5
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All DBs
Position
LG02:complement(16787716..16852084)
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AA seq
1030 aa
AA seq
DB search
MKEIFVGILRVSLLLLLVRPNPLVCQLTTDHRKVPQRAEPQQQEAGGEQGRAPGSWGSWG
PWTSCSLSCGGGVQEQVRPCLPSYTPSLAAAAYPSRPGGHQQRHPHQKPGRRASAQKSTV
PLRHNSPGRPLHSDTVGQAHREGVRGQQSASEAQAQTGRRRGGDTDSQITPGKYGFGKMP
YVVPLQTDTGLTSGTEGTGKAPSHKQRRSPISDSSLSTSRHGGYRPNHRRPLYNNPRVHS
YSPVHSQIPVSQARPRPNLSSNSTPQSQANSNPAWSSSLYQPGQMHLQTRQEPQPSYNPT
STAQQPQGRPYNPLPNSACSGEYNQYRICNTNACPPASGHIRAVQCSSYNSRPFMGRLYE
WEPFNEVPGDQHCELNCRAIGFRFYVRQSDRVIDGTPCGRNETSICVAGRCQSLGCDEYL
GSGKMMDKCGVCGGDNTACKLVSGLFQQHSLNKVGYHKVVEIPEGATKINVTETVKSQNY
LALRSRSGRSIINGNWAIDRPGKYEGVGTMFTYRRPNEITSTAGESFLADGPTNEILDVY
VIYQQPNPGISYEFILPSAKPPQYPDHRNPVHPQQPNHRPGGNTLHEQGGYDQRGNPNQE
GYDPAGGGKYPSHLPDNQVPAVQPPRRQREYNWKLAGATECSSSCGRGSRYTIFHCVHRM
SHEQAPENHCDSSTRPNSQEEPCNVQPCPAFWDIGEWSECSKKCGLGMQHRQVLCRHVYA
NRTLNVHASLCRHLEQPETSSTCQLKICSEWQINTEWSACSVPCGVGQRTREVQCVSNVG
DVVSDDECNMKLRPSDKENCDMGPCAKSWFFTDWGNKCSAECGMGVQTRGVLCLTDHISS
LPLEGCGHQRPAASQVCNNGPCENRIEWFTGPWSQCSAECGSGSQQRAVVCLMKSDEGFN
VMPPYECSSLDKPPNQQSCHHKNCGAKWYHTDWSACSKTCEGGFRVREVRCLSDDTLSSE
ACEEQLKPREREDCNPGPCVPHIDENCRDKYFNCNVVVQARLCVYDYYKTTCCASCTRVA
DRQSHHRGRS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaatctttgtcgggattctaagagtttccctgcttctactgctggtcagaccc
aatcccctggtctgccagcttaccacagaccataggaaggttccgcagagggcagagccc
cagcagcaggaggccggtggagaacagggtcgggctccgggctcctggggctcctggggg
ccctggacctcctgctccctctcctgtgggggaggggtccaggaacaggtccgcccctgt
ctgccatcctacactccctccttggctgcagctgcctacccctccaggccgggtggtcac
cagcaacggcacccccaccagaagccaggccgcagagcgtctgcccagaagtctactgtc
ccactacgccacaacagccctgggagaccactgcactctgacaccgtgggccaggcccac
agagagggagtcaggggccagcagagtgcaagcgaggctcaggcccagactggacgcagg
aggggcggtgacactgacagtcagatcaccccagggaagtatggattcgggaagatgcct
tacgttgtgccactccagacggacacaggtctgacatctgggaccgaagggacagggaaa
gctccctcccacaaacaaagacgctccccaatctctgactccagcctgtcaacaagcagg
cacggaggctacaggccaaaccaccggcgtccgctttataacaacccgcgtgtccacagc
tacagcccggtccatagccagatcccagtttctcaggcccggcccaggcctaatcttagt
tctaactcaacccctcaatcccaggctaactccaacccagcctggtcttcctcactctac
cagcctggacagatgcacctccaaaccaggcaggagccgcagccctcttacaacccgacc
tcaacagctcagcagccccaaggacgaccttataaccccctgcccaattccgcctgttcg
ggagaatacaaccagtacaggatctgcaacaccaatgcctgtcctccggctagtggacac
atcagagcagtacagtgttcttcctacaacagccgtcctttcatgggtcgactatacgag
tgggagcctttcaatgaagttcctggggaccagcattgtgagctgaactgtcgtgctatc
ggtttccgcttctatgtgcgtcagtcggaccgggttattgatgggacgccatgtggccgg
aatgagacgtccatctgtgtggcggggaggtgtcagagtctgggctgtgatgagtatctg
ggctcaggcaagatgatggacaagtgtggggtgtgtggtggtgacaacacggcctgtaag
ctggtgtcagggctattccagcagcacagcctgaacaaggtgggctaccacaaggtagtg
gagatcccggagggagccaccaagatcaacgtcacagagacagtgaagagccagaactac
ttggctcttagaagccgctcaggtcgttccatcattaatggaaactgggcgattgaccgg
ccagggaagtatgagggggtgggcaccatgttcacctaccgacggcctaatgagatcacc
agcaccgccggggagtccttcctggctgacgggcctaccaatgagattctggatgtttat
gtgatctaccagcagcccaacccaggaataagctatgaattcatccttccttctgccaag
cctccacagtaccctgaccacagaaacccagtacacccacagcagcccaaccacagacct
ggaggaaacacactgcatgagcagggtgggtatgaccaacggggaaacccaaaccaggag
gggtacgatccagcaggagggggcaagtacccttcacacctaccagacaaccaagtgcca
gctgttcagccacccagacgacagagagaatacaactggaaactggctggagcaacagag
tgtagttcctcctgtggcagaggtagcaggtacaccatcttccactgtgtccacagaatg
agccatgagcaggcaccagagaaccattgtgacagcagcaccaggcccaactcacaggag
gagccttgcaacgtccagccctgccctgccttctgggacattggtgagtggtcagagtgc
agtaagaaatgtggcctgggtatgcagcaccgccaggtcttgtgcagacatgtgtacgcc
aatcggaccctgaacgtccacgccagcctgtgtcgtcacctggagcagcccgagacctcc
agcacctgccagctgaagatctgcagcgagtggcagataaacacagagtggagtgcctgt
tcggttccctgtggcgtgggacagaggacccgcgaggtgcagtgtgtcagcaatgtgggg
gacgtggtgtcagatgatgagtgcaacatgaagctgcgacccagtgacaaagaaaactgt
gacatggggccctgtgctaagagttggttctttactgactggggaaataagtgttctgct
gagtgtgggatgggcgtgcagacccgtggtgttctgtgcctgaccgatcacattagcagc
ctgcctttggaggggtgtggccaccagcgccccgctgcctctcaggtctgtaacaatggc
ccctgtgagaatcgtatcgagtggttcactggcccctggagtcagtgctcagcagagtgt
ggctctggcagccagcagagggcagtggtgtgtctaatgaaatcagacgaggggttcaac
gttatgccaccctatgaatgttcctccctggacaagcctcctaatcagcagagctgccac
cacaagaactgtggggcaaagtggtaccacacagactggagcgcctgttcaaagacgtgt
gaggggggcttccgtgtgcgcgaggtgcgctgtctgtctgacgatacactgtccagtgag
gcctgtgaggagcagctgaaaccacgggagagagaggattgcaacccaggaccatgcgtg
cctcacatagatgagaactgtcgagacaagtatttcaactgcaacgtggtggtccaagcg
cgtctttgtgtgtacgactactacaagacaacatgctgtgcatcctgcacacgagtggcc
gacagacagtcacatcaccggggacgcagctag
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