Esox lucius (northern pike): 105015487
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Entry
105015487 CDS
T04894
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
els
Esox lucius (northern pike)
Pathway
els03013
Nucleocytoplasmic transport
els03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105015487 (pnn)
03015 mRNA surveillance pathway
105015487 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105015487 (pnn)
03041 Spliceosome [BR:
els03041
]
105015487 (pnn)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105015487 (pnn)
Spliceosome [BR:
els03041
]
Complex C
Other components
EJC/TREX
105015487 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
105015487
NCBI-ProteinID:
XP_010876985
UniProt:
A0A3P8ZIB9
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Position
LG15:complement(26579064..26585158)
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AA seq
710 aa
AA seq
DB search
MAVAVGSLQAQLEKAKESLKNVDDNIRKLTGRDPNELRPGQARRPTIAGIGGGRGRGINL
LRRGLSDIGGGPGGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVATDRQKKRIEIEQK
LEVQAEQERKKVEGERRELFEERRAKQTELRLLEQKVELAQLQEEWNVHNTKIVKYIRTK
TKPPIFYLPGRMCSATQKLLEESQKKMNAMFDERREAFAEHLNKMEARPRRQPQRDNPLG
KDLKKEDQEEGKPTGQVVKVTGNRFDVEMEDEEEEDEATVEEDMKKDRDEGVKGTEDRKE
KRGEAGEKARDHESKKGDSMVAEDEDSRDTRIVELREVDDQMEVTAVVVTEAEGQAREVA
QNKIEDSPVVAGDEVGEAGVEQQKPVEVETEPVQDQDPTVVVSDQEKAVEIPPVEDKEEP
RTEEGVVPLLSEPSPSVEVSDVTSVTPEVQIPLADAGRQPEPVTVVQSKEADEGAVRQNA
DTHLSQTHVTTAPKELEPVSEDASRGRKKSKSKDKKGSGGGRSSSSSSSSSSGSSSSGSS
GSSSSGSSSRSSSSSGSSSSSSSSRSRSRGRKDRKRRRRPSEREGERDRKKAGGERSQNS
SKGNGRESKGSKDKGSKSDRKRTTSEGSRSGKRSSRGDRDRKSDRKEKRR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcagtaggatctttgcaagcccagcttgagaaagcaaaagaaagtttgaaa
aatgtagacgataatattcgtaaattaactggtcgtgatcccaatgaactaagacctggc
caggctagacggccaaccatcgcaggcattggtggaggtaggggacgaggaatcaactta
ttgagacgtggactctctgacatcggcggaggacctggaggacccccagcaaaacagagg
gatattgaaggggccctcctgaggctggccggtgaccagcgagcgaggagagattcacgc
catgacagtgacgctgaggatgatgacgatgtcaaaaagccagcgttgcagtcatcagta
gtagctacctccaaagagcgtacacgtcgagaccttatccaggatcaaaccatggatgaa
aggggaaaacaaaggaatcgacgcatgtttggcctgttgatgggaacattacagaaattc
aagcaggaatccaatgtggcaacagataggcaaaagaaacgcattgagatcgaacagaaa
ttggaagttcaagctgaacaagaacgcaagaaagtggagggtgaaagacgagagctcttt
gaggagagacgtgccaagcagacagagctgagactgttggaacagaaagtggagcttgca
cagttgcaagaggagtggaatgtgcacaacacaaaaattgtgaagtacatccgcacaaag
accaagccgcccattttctatctgcccgggaggatgtgttcagccacccaaaagctctta
gaggagtctcagaaaaaaatgaatgctatgtttgatgagaggcgagaggcatttgccgag
catttgaataagatggaggctcggcctcggcgccagcctcagagggacaaccctttgggt
aaggacctgaagaaagaagatcaagaggagggtaagcccactggtcaggtagtcaaagtg
acaggtaaccggtttgatgtggagatggaggatgaggaggaggaagacgaggcaaccgta
gaggaggacatgaagaaagacagagatgagggtgtaaagggtactgaggacaggaaggaa
aaacgaggagaggcaggagagaaagccagggatcacgagtctaagaagggggattccatg
gtagctgaggatgaggacagtcgagacactagaatagtggagttaagggaggtggatgac
cagatggaagtaactgcagtggtggtgacggaggctgaggggcaggccagggaggtggct
cagaataagattgaggatagtccagtggtggccggggacgaggtaggtgaggcaggagta
gaacagcagaaaccagtcgaggttgaaacggagcccgttcaggatcaggaccccaccgtg
gtggtgagcgaccaggagaaggccgttgaaataccaccagttgaagataaagaagagcca
cgtactgaagaaggggtcgttcccctgctctcagagcccagtccaagtgtggaagtctct
gatgtaacatctgtgacccctgaggtgcagatccccctggcggatgctggaaggcagcca
gagcctgtcaccgtggtgcagagcaaggaggctgatgaaggtgcagtgaggcagaacgct
gatacccacctttcccagacccatgttaccactgcccccaaggagctggagcctgtgagc
gaggatgccagtagggggcgtaaaaagtccaagtcaaaggacaagaaaggaagtgggggt
ggccggagcagcagtagctcctcaagcagttcctctggctcctcatccagcgggagctct
ggctcctcttctagtggctcctcaagcaggagcagctcatccagtggcagctcctcctcc
agctcctctagcaggagccgcagtcgggggaggaaggaccggaagcgtaggaggaggcca
tctgagagagagggggagagggacaggaagaaggcaggcggtgaaaggagccagaactca
tccaaaggcaatggtcgtgaatccaaaggttcgaaagacaagggctccaagtctgacagg
aaaaggactacttctgagggcagccggtcaggaaagaggtcttctcgtggtgacagggat
cgcaagtctgataggaaggaaaaaaggcgttaa
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