KEGG   Esox lucius (northern pike): 105015487
Entry
105015487         CDS       T04894                                 
Symbol
pnn
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
els  Esox lucius (northern pike)
Pathway
els03013  Nucleocytoplasmic transport
els03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105015487 (pnn)
   03015 mRNA surveillance pathway
    105015487 (pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:els03019]
    105015487 (pnn)
   03041 Spliceosome [BR:els03041]
    105015487 (pnn)
Messenger RNA biogenesis [BR:els03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105015487 (pnn)
Spliceosome [BR:els03041]
 Complex C
  Other components
   EJC/TREX
    105015487 (pnn)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA Aconitase_C
Other DBs
NCBI-GeneID: 105015487
NCBI-ProteinID: XP_010876985
UniProt: A0A3P8ZIB9
LinkDB
Position
LG15:complement(26579064..26585158)
AA seq 710 aa
MAVAVGSLQAQLEKAKESLKNVDDNIRKLTGRDPNELRPGQARRPTIAGIGGGRGRGINL
LRRGLSDIGGGPGGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVATDRQKKRIEIEQK
LEVQAEQERKKVEGERRELFEERRAKQTELRLLEQKVELAQLQEEWNVHNTKIVKYIRTK
TKPPIFYLPGRMCSATQKLLEESQKKMNAMFDERREAFAEHLNKMEARPRRQPQRDNPLG
KDLKKEDQEEGKPTGQVVKVTGNRFDVEMEDEEEEDEATVEEDMKKDRDEGVKGTEDRKE
KRGEAGEKARDHESKKGDSMVAEDEDSRDTRIVELREVDDQMEVTAVVVTEAEGQAREVA
QNKIEDSPVVAGDEVGEAGVEQQKPVEVETEPVQDQDPTVVVSDQEKAVEIPPVEDKEEP
RTEEGVVPLLSEPSPSVEVSDVTSVTPEVQIPLADAGRQPEPVTVVQSKEADEGAVRQNA
DTHLSQTHVTTAPKELEPVSEDASRGRKKSKSKDKKGSGGGRSSSSSSSSSSGSSSSGSS
GSSSSGSSSRSSSSSGSSSSSSSSRSRSRGRKDRKRRRRPSEREGERDRKKAGGERSQNS
SKGNGRESKGSKDKGSKSDRKRTTSEGSRSGKRSSRGDRDRKSDRKEKRR
NT seq 2133 nt   +upstreamnt  +downstreamnt
atggcggtggcagtaggatctttgcaagcccagcttgagaaagcaaaagaaagtttgaaa
aatgtagacgataatattcgtaaattaactggtcgtgatcccaatgaactaagacctggc
caggctagacggccaaccatcgcaggcattggtggaggtaggggacgaggaatcaactta
ttgagacgtggactctctgacatcggcggaggacctggaggacccccagcaaaacagagg
gatattgaaggggccctcctgaggctggccggtgaccagcgagcgaggagagattcacgc
catgacagtgacgctgaggatgatgacgatgtcaaaaagccagcgttgcagtcatcagta
gtagctacctccaaagagcgtacacgtcgagaccttatccaggatcaaaccatggatgaa
aggggaaaacaaaggaatcgacgcatgtttggcctgttgatgggaacattacagaaattc
aagcaggaatccaatgtggcaacagataggcaaaagaaacgcattgagatcgaacagaaa
ttggaagttcaagctgaacaagaacgcaagaaagtggagggtgaaagacgagagctcttt
gaggagagacgtgccaagcagacagagctgagactgttggaacagaaagtggagcttgca
cagttgcaagaggagtggaatgtgcacaacacaaaaattgtgaagtacatccgcacaaag
accaagccgcccattttctatctgcccgggaggatgtgttcagccacccaaaagctctta
gaggagtctcagaaaaaaatgaatgctatgtttgatgagaggcgagaggcatttgccgag
catttgaataagatggaggctcggcctcggcgccagcctcagagggacaaccctttgggt
aaggacctgaagaaagaagatcaagaggagggtaagcccactggtcaggtagtcaaagtg
acaggtaaccggtttgatgtggagatggaggatgaggaggaggaagacgaggcaaccgta
gaggaggacatgaagaaagacagagatgagggtgtaaagggtactgaggacaggaaggaa
aaacgaggagaggcaggagagaaagccagggatcacgagtctaagaagggggattccatg
gtagctgaggatgaggacagtcgagacactagaatagtggagttaagggaggtggatgac
cagatggaagtaactgcagtggtggtgacggaggctgaggggcaggccagggaggtggct
cagaataagattgaggatagtccagtggtggccggggacgaggtaggtgaggcaggagta
gaacagcagaaaccagtcgaggttgaaacggagcccgttcaggatcaggaccccaccgtg
gtggtgagcgaccaggagaaggccgttgaaataccaccagttgaagataaagaagagcca
cgtactgaagaaggggtcgttcccctgctctcagagcccagtccaagtgtggaagtctct
gatgtaacatctgtgacccctgaggtgcagatccccctggcggatgctggaaggcagcca
gagcctgtcaccgtggtgcagagcaaggaggctgatgaaggtgcagtgaggcagaacgct
gatacccacctttcccagacccatgttaccactgcccccaaggagctggagcctgtgagc
gaggatgccagtagggggcgtaaaaagtccaagtcaaaggacaagaaaggaagtgggggt
ggccggagcagcagtagctcctcaagcagttcctctggctcctcatccagcgggagctct
ggctcctcttctagtggctcctcaagcaggagcagctcatccagtggcagctcctcctcc
agctcctctagcaggagccgcagtcgggggaggaaggaccggaagcgtaggaggaggcca
tctgagagagagggggagagggacaggaagaaggcaggcggtgaaaggagccagaactca
tccaaaggcaatggtcgtgaatccaaaggttcgaaagacaagggctccaagtctgacagg
aaaaggactacttctgagggcagccggtcaggaaagaggtcttctcgtggtgacagggat
cgcaagtctgataggaaggaaaaaaggcgttaa

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