Esox lucius (northern pike): 105015558
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Entry
105015558 CDS
T04894
Symbol
hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
els
Esox lucius (northern pike)
Pathway
els04137
Mitophagy - animal
els04140
Autophagy - animal
els04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105015558 (hif1a)
04137 Mitophagy - animal
105015558 (hif1a)
04148 Efferocytosis
105015558 (hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105015558 (hif1a)
Transcription factors [BR:
els03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105015558 (hif1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
HIF-1a_CTAD
PAS_11
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
105015558
NCBI-ProteinID:
NP_001297776
UniProt:
A5H732
LinkDB
All DBs
Position
LG15:16665130..16686231
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AA seq
763 aa
AA seq
DB search
MDTGVVPEKKSRVSSERRKEKSRDAARCRRGKESEVFYELAQELPLPHSITSNLDKASIM
RLAISYLRMRNLLSTDEGAVEKEEQEESELDSQFNGSYLKALEGFVMVLSEDGDMIYLSE
NVNKCLGLAQFDLTGLSVFEYAHPCDHEELREMLVYRTGTSKKSKEPNTDRSFFLRMKCT
LTSRGRTVNVKSATWKVLHCSGHVRVHEVPAEQGSCGHKEVPVPYLVLVCDPIPHPSNIE
APLDTKTFLSRHTLNMKFTYCDERITELMGYNPEDLLNRSVYEYYHALDSDHLTKTHHNL
FTKGQVSTGQYRMLAKRGGFVWLETQATVIYNNKNSQPQCVVCVNYVLSGIEEEKLVLSL
EQIEDMRPVKKERIEEEEVEEESSEAEMSPVPLKEELSPELDVIKLFTQAMEKEPVTSLY
DRLKAEPEALTVLAPAAGDTIISLDFSSPDADVLLKEVPLYNDVMLPSTSDKLALPLSLL
PPSEQPLAPLCSVDTKAGPDSSSNPVSHTSSEPDGPLDFCFPMDSDINSAFKLDLVESLF
AIDTEPKTPFSSQAMEDLDLEMLAPYIPMDDDFQLRTLSPEEPLTCGPAQPPDSSPHCSP
LRLTKEVHNYPGSPFSAPSSQTTSPAPAALEADDSRRSASLLTKTAPQEISLSKLVTQNA
QRKRKLSLSQAFGIGAPLQDPPDLGKKQKVCDRGSSEGTSNRTVLLLPTDLASRLLGISS
EGSGSPFTLPQLTRYDCEVNAPVAGRQHLLQGEELLRALDQVN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggagttgtcccagaaaagaaaagcagggtgagttcggagcggaggaaggag
aagtcccgggatgcagcgcgatgccggagagggaaggagtctgaggtgttctatgagctg
gcccaggagctccctcttccccacagcatcacctccaacctggacaaggcctccatcatg
agactggccatcagctacctgcgcatgaggaatctgctgagcacagatgaaggggcggtc
gagaaggaggagcaggaggagagtgagctggactcccagttcaatggctcctatctgaag
gctctggagggcttcgtcatggtgctgtctgaggacggggacatgatctatctctctgag
aacgtcaacaagtgcttgggtcttgcacagtttgacctgactggacttagtgtgtttgaa
tacgcacacccctgtgaccacgaggagctgagggagatgctggtttacagaacagggacg
tcgaaaaagtccaaggaacctaacaccgaccgtagcttcttcctgcggatgaagtgtacc
ctcaccagccgggggcgcacggtcaatgtcaagtcggccacctggaaggttctccactgc
tcaggccatgtgcgggtgcatgaggtcccggctgagcagggctcctgtgggcacaaggag
gttcctgtcccctacctggtgctggtgtgtgatcccatcccacacccctccaacatcgag
gcgccgctggacaccaagaccttcctcagccgccacactctgaacatgaagttcacgtac
tgtgatgagaggatcactgagctgatgggctataatccggaggacctgttaaaccgctcg
gtttatgagtactaccacgccctggactcagaccacctcaccaagactcatcacaacttg
tttacgaaaggtcaggtgagcacaggccagtaccgcatgttggccaagagaggaggcttt
gtgtggctggagactcaggccactgtcatctacaacaacaagaactcccagccccagtgt
gttgtgtgtgtcaactatgtgctcagtggcattgaggaggagaagctggtcttgtctctg
gagcagattgaggatatgaggcctgtgaagaaggagcggatcgaggaggaagaggtggag
gaggagagctctgaggcagaaatgtcccctgtgcccctaaaggaggagctgagcccagag
ctggatgttatcaagctgttcacccaggccatggagaaggagcctgtgaccagcctgtac
gacagactgaaggcagaaccagaggccctcactgttctggcccctgctgcaggagacacc
atcatctctctggacttcagcagccctgacgctgatgtcctcctgaaggaggtgcctctc
tacaacgatgtgatgctgccctctactagtgacaagctggcgctgcctctctcactgctc
ccccccagtgagcagcccctggcccccctctgctcagtggacaccaaggctggtccagac
tcctccagcaacccggtcagccacacctcctctgagcctgatggcccactggacttctgt
ttcccaatggactctgacatcaactcagcattcaaactggacctagttgagagcctgttt
gccattgacacagagcccaagactcctttctcctcacaggccatggaggacctagacctg
gagatgttggctccatacatccccatggatgacgacttccagctgcgcaccctgtcccca
gaggagcccctgacgtgtggcccagcccagcccccagacagctccccccactgctctcct
ctgcgcctgaccaaggaggtccacaactaccccggctcccccttcagcgccccaagcagc
cagacgacttcccctgccccagcagccttagaggcagatgacagccgtcgctctgcctcc
ttactcaccaaaacggcgcctcaagagatatcactcagcaaattggtcacccagaatgca
cagcgcaagaggaagttatctctgtcccaagctttcggaataggggcaccactccaggac
cctcctgacttgggtaagaagcagaaggtgtgtgaccgtggaagctctgagggaacctcc
aaccggaccgtactgctcctgcctacagacctggcaagccgtcttcttggcatctcctca
gagggcagcggctcgcccttcacccttccccaactgacccggtatgactgtgaggtcaac
gcccccgtggcgggtcgccagcacctgttgcagggcgaggagcttttgcgtgccctggac
caagtcaactga
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