Esox lucius (northern pike): 105016081
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Entry
105016081 CDS
T04894
Symbol
hnrnpu
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U isoform X1
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
els
Esox lucius (northern pike)
Pathway
els03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105016081 (hnrnpu)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105016081 (hnrnpu)
Spliceosome [BR:
els03041
]
Common components
Common spliceosomal components
hnRNP proteins
105016081 (hnrnpu)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
105016081
NCBI-ProteinID:
XP_028981437
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Position
LG15:389434..403699
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AA seq
766 aa
AA seq
DB search
MSSTNVKKLKVNELKDELKKRKLSDKGLKAELMDRLQAALNEEAQAGGDNADKKAGQGDG
TVSLDDMGEEDLDEDLVRESMEADGEEDGDRCEGKAGNIDDDMGEDAGVEMDKSDDEEDA
LLKEDDEEMDNDDDALGVLPVEGDADKDTSAEQKNKKGVKRRREEHGRGYFEFIEESKYS
RAKSPQPPLEEEDEEIDDTTVCLDTYNSDLHFKVSRDRYSASSLTMESFAYLWAGGRATH
GVAEGKACFEMKIIEKIPVKHISSKGIDIHEVLVGWSLANGTLLLGEEEHSYAFSAKGKK
TTNCFTEDFGESFDENDVVGCLINFEGSEVELSFSKNGQDLGVAFKVDKASLDGRPVFPH
VLCHNCAVEFNFGQREVPLFSLPAGYSFMQQIPINKRVRGPKGPDTKEDCEVIIMVGLPG
AGKTAWVTKHTQEHPGKYNILGTNTILEKMMITSLKRQMKDVTKLTAISQRAPLFLGKFI
EIAARKKRNYILDQTNVSAHAQRRKMCLFAGFRRKAVVVCPTDDEYKQRTQKKAETEGKD
VPEHAVLKMKGLYTLPQLGDCFSEVSYVELQKDEASKLLDQYKEESQSALPPEKKANQGG
GPPKRGGNQRGRGGRGQGQRGGRGGFQIRGNFRGGPGPRGVFNRPPRGFSPPPAFRGGFS
NHATFNRGARGIPSRGGAPRGGPGRGNMSNMGSNMGANRGGNMTHGGRGGNRGSFPQKFR
GRGGNNRSFNKNGRFGMNKAQAFNQSWQEGFWNQKPWSQQYHPGYY
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagctctaccaacgtaaagaagttaaaggtaaatgagttgaaggacgagctaaagaag
aggaagctgtcggacaaggggctgaaggccgagttaatggaccggctacaggccgcactg
aacgaagaggctcaagcgggaggagataatgccgacaagaaggctggccaaggcgacggg
acagtcagcctagatgatatgggagaggaggatctggatgaagacctggttagggagagt
atggaggcggacggagaggaagatggagacaggtgcgaagggaaagcagggaatatcgac
gatgatatgggcgaggatgccggagtggagatggataaatcggacgatgaggaagatgct
ttattaaaagaagatgacgaggaaatggacaatgatgatgatgcactaggagttctccct
gtagagggggatgcggacaaagacacgagtgctgagcagaagaataagaagggtgttaag
agacgccgggaggaacatggaaggggctactttgagtttattgaagaaagcaagtacagc
cgggccaagtcaccccagccccccctggaggaagaggacgaggagattgacgacaccact
gtctgcttggatacttataacagcgacctgcattttaaggtgtcccgggaccgatacagc
gcatcatctctcaccatggagagctttgcctacctgtgggccggaggccgggccacgcat
ggggtggctgaggggaaggcctgctttgagatgaagatcattgagaagatccccgtcaaa
cacatctccagcaaaggcatagacatccacgaggttctggtgggctggtcattagccaat
ggaacactgttgctaggagaggaggaacattcgtatgccttctctgccaaagggaagaaa
accaccaattgctttactgaggactttggagagtccttcgatgaaaacgatgttgtcgga
tgcctgattaactttgagggctcagaggtggagctgtcattcagtaagaacggccaggac
ctgggtgtggccttcaaggtggacaaggcttctctggacggacggccagtcttccctcac
gtcctctgtcacaactgtgctgtggagttcaactttggacagagggaggtgccattgttt
tccctaccagccggatacagcttcatgcaacagattcccatcaacaagagagtcagaggt
cccaaggggccagacaccaaggaagactgcgaggtgatcatcatggtcgggctgcctggg
gctggaaagactgcatgggtcaccaagcacacccaggagcatcctgggaaatacaacatc
ctgggaaccaacaccatcctggagaagatgatgatcactagtttgaaacgccaaatgaag
gatgttactaaactcaccgccatctcccagcgtgctcctcttttccttggaaaattcatt
gaaattgctgctcgcaaaaagcggaactacatccttgaccagaccaatgtgtccgcgcat
gcacagaggaggaagatgtgtttgtttgcaggcttcagacggaaggctgtggtggtttgt
cctactgatgacgaatacaagcagaggacacagaagaaagctgagacggaagggaaagat
gtaccagagcacgctgtgctcaagatgaaaggtctctacaccttaccacagcttggggac
tgcttcagtgaggtcagctatgtggagctgcagaaggatgaggcctccaagctattggac
cagtacaaggaagagagccaatctgctcttcccccagagaagaaggccaaccaggggggc
gggccgcctaagagagggggcaaccagcgtggccgtgggggcagagggcagggacagagg
ggtgggcgaggaggttttcagattagaggcaacttcaggggaggtccaggacctcgtggg
gtattcaaccgccctcccagaggtttctccccacctccggcctttcgagggggcttctcc
aaccacgccaccttcaacaggggagccaggggcattcccagcagagggggtgcacccagg
gggggtcctggcaggggcaacatgagtaacatggggagcaacatgggggctaacaggggt
ggcaacatgacccatggtggacgtgggggcaacaggggcagcttcccacagaagttcaga
ggcagagggggcaacaaccgcagcttcaacaagaacggcagatttggcatgaacaaagcc
caggctttcaaccagagttggcaggaggggttctggaatcagaagccatggagtcaacaa
taccacccaggatactactga
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