Esox lucius (northern pike): 105016113
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Entry
105016113 CDS
T04894
Symbol
itgb5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
els
Esox lucius (northern pike)
Pathway
els04145
Phagosome
els04148
Efferocytosis
els04510
Focal adhesion
els04512
ECM-receptor interaction
els04810
Regulation of actin cytoskeleton
els04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105016113 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105016113 (itgb5)
04148 Efferocytosis
105016113 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
105016113 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105016113 (itgb5)
04810 Regulation of actin cytoskeleton
105016113 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105016113 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
els04515
]
105016113 (itgb5)
Membrane trafficking [BR:
els04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
105016113 (itgb5)
Cell adhesion molecules [BR:
els04515
]
Integrins
Integrin beta subunits
105016113 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
105016113
NCBI-ProteinID:
XP_010878017
LinkDB
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Position
LG16:22782622..22829051
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AA seq
805 aa
AA seq
DB search
MMWSPWQLVYRTAIGCMVLEILIHNVAQGLNVCMSGSATSCEECLLIHPSCAWCAQEEFG
RVRTLMSRCDLSQNLQKRGCEAYNIENPRSTTRVVKSEPLSSKGSGPTQYDVIQIMPQKI
SLSLRPSDQTSFKVQVRQVEDYPVDLYYLMDLSLSMKDDLDSIRNLGTKLADEMRKLTSN
FRLGFGSFVDKNMSPFSYTAPKYQDNPCNGYKLFPNCVPSFGFRHLLSLTDKVDRFNEEV
QKQMVSRNRDAPEGGFDAILQAAVCKERIGWRKEAFHLLVFATDDVPHLALDGKLGGLVQ
PHDGKCHMNEKNEYSGSTEMDYPSLALLGEKLAENNIYLIFAVTKRHYVIYKNFTTLIPG
TTVEILDADSKNIIQLIVNAYNNIRSKVELTVWDQPEDLSLTFTATCQDGQPLPGLRKCA
DLKIGDTVSFNVSVEARGCPPPGTRQSFTVKPVGFKDRLEVSVDYRCDCGCTHRARANSS
RCSSRGQYVCGTCRCDTGHLGARCECHEGEAGAVYQGACREAEGKQICSGRGECSCNQCL
CYESEFGKIYGTFCECDDFSCARHKGVLCSGHGECHCGECKCHAGYIGDNCNCSTETLSC
VSDDGQICSGRGNCACGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLAD
NQTCQRLCKDEIITVETLKTEDPNAVLCLYKTENECVMKFTYSEHASGMSVLTALKEPEC
GAAPDAMTVLLAVVGSILLVGIVLLAIWKLVITVHDRREFARFQSARSRARYEMACNPLY
KQPITSHPVETDFSMYSKSYNGATH
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggagcccatggcagttggtttaccgtacagctattggctgcatggttctggaa
atacttattcacaatgttgctcaaggcctgaatgtttgtatgagtggcagcgctacatcc
tgtgaggaatgcctgctcattcacccaagctgcgcctggtgcgctcaagaggagtttggc
agggtacgcaccctgatgtcacggtgcgacctgagtcagaacctgcagaagagagggtgt
gaggcctataacatagagaatcccagaagcaccaccagggtagtgaagagcgaaccactc
agctccaaaggctctggtcccacccagtatgatgtgattcagatcatgccccagaagatc
tccctgagtctccggccaagtgatcagacgtcattcaaggtgcaggtgcgtcaggtggag
gactaccccgtggacctctactacctgatggacctgtctttgtccatgaaggacgacctg
gacagcatcaggaacctggggaccaagctggccgatgagatgaggaaactcacctcaaac
ttcagactgggcttcggctcattcgtagacaagaacatgtccccgttctcctacacagcc
ccaaagtaccaggacaacccctgcaatggatacaagctgttccccaactgtgtcccctcc
ttcgggtttcgccacctcctttccttgactgacaaagtggatcgcttcaacgaggaggtg
cagaaacagatggtgtctcgcaacagggacgctccagagggaggctttgatgccatcctg
caggctgctgtctgtaaggagagaataggttggagaaaggaggctttccacctgctggtg
tttgccacagacgatgtgcctcacctggccttggatggcaagctgggaggcctggtccag
ccacacgatggaaagtgccatatgaatgaaaagaatgagtacagcggctccaccgagatg
gactatccctccttggctttgttgggggagaagttggcggaaaacaacatatatcttatc
tttgctgtgacaaaaaggcactatgtcatttacaagaatttcacgacactcatccctgga
accacagtggagattctcgacgcggactccaagaacatcatccaactcattgtaaacgct
tacaataacatccggtccaaagtggagctgactgtttgggaccaacccgaggacctcagt
ctgaccttcactgctacctgtcaggatggacaacctctgccaggcctcaggaaatgtgct
gacctcaagatcggagacacggtgtccttcaacgtgagcgtggaggcgagaggctgccct
cctccggggaccaggcagagtttcaccgtcaagccggtgggcttcaaggatcgcctggag
gtttccgtggactatcgctgcgactgtggctgcacgcaccgcgcccgggccaacagcagc
cgctgcagctccaggggccagtacgtctgcggcacgtgtcgatgtgacacgggccacctg
ggcgcgcgctgcgagtgccacgagggcgaggccggagccgtgtaccagggcgcctgcagg
gaggcagaggggaagcagatctgtagcgggagaggcgagtgcagctgtaaccagtgcctc
tgttatgagtccgagttcgggaagatctacggcaccttctgcgagtgcgacgacttctcc
tgtgcccgacataagggcgtcctctgttccggtcacggggagtgccactgtggagagtgc
aagtgccacgccggctacatcggggacaactgcaactgttccacggaaaccctgtcctgc
gtgtccgacgacggccagatctgcagcggccgagggaactgtgcgtgcgggcgatgccag
tgcacggaaccaggggccttcggggacacgtgcgagaaatgccccacctgcccagacgca
tgcggcaccaagagggaatgcatcgagtgccgactattcaactctggaagactggccgac
aatcagacctgccagcggctgtgcaaggacgagatcataaccgtggaaacgcttaaaacg
gaagaccccaacgctgtcctctgcctgtacaagacggaaaatgagtgcgtaatgaaattc
acatactctgaacatgccagtggaatgtcagtcctcaccgcgctaaaagagccagagtgc
ggtgcagcgcctgacgccatgaccgtcctcctggccgtggtgggcagtatcctgctggtg
ggaatcgtgctgctcgccatctggaagctggtcatcaccgtgcacgaccggcgagagttt
gcccgcttccagagtgcacggtcacgtgcgcgttacgagatggcctgcaacccactctac
aagcagcccattaccagccacccagtagagacagacttcagtatgtacagcaagtcctac
aacggagcaacccactga
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