Esox lucius (northern pike): 105016278
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Entry
105016278 CDS
T04894
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
els
Esox lucius (northern pike)
Pathway
els03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105016278 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105016278 (hspd1)
03110 Chaperones and folding catalysts [BR:
els03110
]
105016278 (hspd1)
03029 Mitochondrial biogenesis [BR:
els03029
]
105016278 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
els04147
]
105016278 (hspd1)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
105016278 (hspd1)
Messenger RNA biogenesis [BR:
els03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
105016278 (hspd1)
Chaperones and folding catalysts [BR:
els03110
]
Heat shock proteins
HSP60 / Chaperonin
105016278 (hspd1)
Mitochondrial biogenesis [BR:
els03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
105016278 (hspd1)
Exosome [BR:
els04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105016278 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
105016278 (hspd1)
Exosomal proteins of breast cancer cells
105016278 (hspd1)
Exosomal proteins of colorectal cancer cells
105016278 (hspd1)
Exosomal proteins of bladder cancer cells
105016278 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
Motif
Other DBs
NCBI-GeneID:
105016278
NCBI-ProteinID:
XP_010878297
UniProt:
A0A3P8ZJT1
LinkDB
All DBs
Position
LG16:22403840..22410261
Genome browser
AA seq
576 aa
AA seq
DB search
MLRLPTVMRQVRPVCRALAPHLTRAYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDSISKGANPVEIRRGVMLAVETVIAELKRMSKPVTTPEEIAQVATISANGDV
EVGTIISNAMKKVGRKGVITVKDGKTMYDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISTVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDMAVATGGTVFGDDAVGLALEDIQAHDFGKVGEVSVTKDDTMLLKG
KGDAAAIEKRQAEIAEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINADQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQATAEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTEMPKEEKEAGMPGGMGGMGGMGGMGGGMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtctacccacagtaatgagacaggtgaggcccgtctgcagggccctggccccc
cacctcacccgggcctatgctaaggacgtcaagtttggagctgatgcccgggccatgatg
ctgaagggtgtggatctgctggctgatgcagttgccgtcaccatgggacccaagggccgc
acagttatcatcgagcagagctggggcagccccaaggtgacaaaggatggcgtcaccgta
gccaaggccatcgacctgaagtgcaagtaccagaacattggtgccaagctggtccaggat
gtggccaacaacaccaacgaggaagctggtgatggaaccaccacagccactgtgctggcc
agggcaattgccaaggagggctttgacagcatcagtaagggagctaaccctgtggagatc
cgccgaggcgtcatgctggctgtggagactgttatcgcggagctaaagagaatgtccaag
ccagtcaccacacctgaagagattgcccaggtggccaccatctctgctaatggcgatgtg
gaagtgggcaccatcatttccaacgccatgaagaaagtgggccgtaagggagtcataacc
gtcaaggatggtaaaaccatgtacgatgagctggagatcatcgaggggcttaagtttgac
cgtggatacatctccccttacttcattaacacagccaaaggccagaaatgcgagttccaa
gatgcctatttgttgctgagtgagaagaagatctctactgtccagagcatcgtcccagcc
ctggaactggccaaccagcaccgtaaacccctggtcatcgtggctgaggatgtggacgga
gaggcactcagcaccctggtccttaaccggctgaaggtggggctgcaggtggtggcagtg
aaggcaccaggctttggagacaacaggaaggcccagctgcatgacatggctgttgccacc
gggggcactgtgtttggggacgatgcagtgggccttgccctggaggatatccaggcccac
gacttcggcaaggtcggcgaggtgtccgtgaccaaggacgacaccatgctgctgaagggg
aagggagacgcggcggccatcgagaagcgccaggccgagatcgccgagcagctggagaac
accaccagtgactacgagaaggagaagctcaacgagaggctggccaagctgtctgatgga
gtggctgtgctcaaggtgggaggaacaagcgacgtggaggtgaacgagaagaaggaccgc
gtgaccgacgctctgaatgccacgcgggctgctgtggaggaggggatcgtgcccggcgga
ggctgtgccctgctgcgctccatccctgctctggatgccctggtgcccatcaacgccgac
cagaagattggcattgacatcattagacgagccctgcgggtgccagccatgaccattgct
aagaatgctggtgtggagggttcccttgtggtggagaagatcctccaggccacggcggag
attggctacgacgccatggagggagagtacgtcaacatggtagagaagggcatcatcgac
cccaccaaggtggtgaggaccgcactaatggatgccgctggtgtagcctccctgctgtcc
accgctgagtgcgtcgtcacagagatgcccaaggaggagaaggaggctggcatgccaggg
ggaatgggcggcatgggcggtatgggaggcatgggcggcggcatgttctaa
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