Esox lucius (northern pike): 105016531
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Entry
105016531 CDS
T04894
Symbol
col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X3
KO
K08133
collagen type XIV alpha
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
els00535
]
105016531 (col14a1)
Proteoglycans [BR:
els00535
]
Extracellular matrix (ECM) proteoglycans
Others
105016531 (col14a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
FN3_Tor_3rd
DUF4959
VWA_3
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
105016531
NCBI-ProteinID:
XP_012993385
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All DBs
Position
LG16:complement(2921610..3043481)
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AA seq
1781 aa
AA seq
DB search
MLIVGPSVRMWCPLVFMVLAVHFPAPVHGQVAAPRRLRFRVLGPSKLHVSWKEPKGDFDS
YTVLYNSEPGEEEKQLRVSKGENKVVINDFDAMREYYVKVIAVNGDQQSRALRGKYSAED
LDGGSEGEGTLSQRLKNAGGAEDINEIAGVGPFVCATRSVADIVILVDGSWSIGRINFRL
VRLFLENLVNAFSVGIDQTRIGLAQYSGDPRIEWHLNAFTTKEAVIDAVKSLPYKGGNTL
TGLALTYILENSFKPESGSRSGVPKVGILITDGKSQDDVIPPASNLRDEGIELFAIGVKN
ADENELRAIASEPHDTHVFNVADFSVMSTIVEGLTKIVCERVEDQDKEIKGEPASQETQG
APEDLVTSEVTARSFRVSWSPAPGKVEKYRVVYYPAQAGQPEEAVVDGTETSVELQHLNS
LTEYQLAVFAVYPSSASEGLRGSETTLALPMVNGLELYNVTHNSLRARWRSVDGASGYMV
LYAPLSEDGASDEKEVNVSEAVTDLELVTLAPATEYTVTVYALYGEEASDPVTNQKTTLP
LSPPRNLLFTEVDYNSARLSWDAAPEKVTGYRIIKTDGEQTDEVEIGPVTSWPLNDLKAL
TEYSVAIFGIYDEGQSEALFGSFTTEPAPGPLDLRASEFTTDSFQVSWGHSAPDIALYKL
TWAPVDGEDMREMVLNGDVNSVLLSPLNPDTEYEVMLQAVFKDESESDVVSVVERTLTRT
TTVATTTAAMRQAVQDLRVEGETTHSLELFWEPQDPVVDQYRVTYVSLRGDRNQETVLVP
GRETSVLLQPLLSDTGYKLTVTPVYQDGQDGVSESTVGRTLPLSAPSNLRVSEEWYNRFR
IAWDMPPSPTMGYRVIYQPTSVSGTALETFVGDDVNTILLVNLLSDTEYNVKVIASYTTG
SSEPLSGVARTLNLGVANLNTYQVRTSSLCAQWKPHSQASQYRVVIQSLLSGQKQEVSVS
GSASRQCFYDLTPNSQYQISVYTWLQDMEGPAVTTTATTHPAPTLPPTPPPTLTLLPTIP
AAREVCKAAKADLAFLVDGSWSIGDDNFQKIIRFLYSTMGALDLIGPDGTQVAIAQFSDD
ARTEFKLNSYANKEALLDAIQRIAYKGGNTKTGGAIKHVKEAIFTPDGGVRRGVPKVLVV
LTDGRSQDDVNKISKEMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAVKK
IEEQLITFVCEAATATCPSVLMSGNTLAGFRMMEMFGLVEKEYGDVKGVSLEPGSFNSFS
CYRIHKDALVSQPTKYLHPEGLPSDYTITILFRLLPETPQEPFALWEILNKDNEPLVGVI
LDNGGKTLTFFNYDYKGDFQTVTFEGPDIKKIFYGSFHKVHVTVTKTTARLVIDCKAVGG
KPINAAGNITTDGVEVLGRMVRSRGNRDNSAPFQIQMFDIICSTSWASRDKCCELPGLRV
EEDCPAMPHACTCSQDSKGPPGPTGPPGGPGIRGPRGDRGEPGNVGPQGLVGEIGPPGPQ
GPPGPQGPSGHSIQGQPGGPGERGEKGEVGAPGPQGGSGSPGSPGRDGAVGQRGLPGKDG
PQGQQGSSGPMGSPGAPGAPGGSGSPGPMGDQGPPGPAGTKGEKGERGDLQSQAAVRALA
RQVCEQLIQSHLSRYNSVLNQIPTQAVSVRTVPGPPGNPGRTGLPGPQGEQGPPGRPGFP
GANGQNGRPGERGFAGEKGEKGSQGLGTQGPRGPPGPPGIPGEGRTGSQGPPGRPGTQGP
PGRPGTPGSTGPAGPAGYCDQNSCLGYNVGGGREQEYENDY
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgtaggaccctcagttaggatgtggtgtccactagtcttcatggtgttggcg
gtccatttcccagcccccgtccatggccaagtcgcagcgccacgcagattgcgttttaga
gtgctcggtccgagcaaattgcatgtgtcctggaaagagccgaagggagactttgacagc
tataccgttctgtacaacagtgaaccaggtgaagaggagaagcaattgcgcgtttcaaaa
ggggaaaataaagtggtcataaacgactttgatgccatgagggagtactacgtcaaagtt
atagctgtgaacggtgaccagcaaagcagagcactgcgagggaagtactcagctgaagac
ctggatggagggagcgagggtgagggcacattgtctcagagacttaagaacgctggaggg
gctgaggacattaatgagatagcaggagtgggtccgtttgtctgtgcgacccggtccgtg
gccgacatcgttatcctggtggacgggtcctggagcatcggcaggatcaacttccgcctg
gtccgcctgttcctggagaacctggtcaacgcgttcagcgtcgggatcgaccagacccgg
ataggtctggcccagtatagcggagatcccaggattgagtggcacctgaatgccttcacc
accaaggaggcagtgatcgacgccgtgaagagtctgccttataaaggaggaaacaccttg
actggcctggccctgacctacatcctggagaacagctttaagccagagtcgggctcccgt
agcggtgttcccaaagttgggatcctgatcacagacgggaagtcccaggacgatgtgatc
cctccggccagtaacctgagggatgaaggcatcgaactctttgccatcggggtgaagaac
gctgatgagaatgagctgcgggccattgcctcggagcctcacgacacccacgttttcaac
gtggcggacttcagcgtcatgagcaccatcgtagagggactcaccaagatagtctgtgag
cgcgtggaggaccaggacaaggagattaaaggagagccggccagccaggagacacaggga
gcccccgaggacctggtgacatcagaggtcacggccaggagtttcagggtgtcctggagc
cccgcccccggcaaggtggagaagtaccgtgttgtttactacccagcgcaggcaggacaa
cctgaagaggctgtggtggacggcacagagacctcggtggagctgcaacacctcaactct
ctgaccgagtaccagctggccgtgtttgctgtgtaccccagctcagctagtgaggggctc
cggggcagcgagaccaccttggcactccccatggtgaacggcctggagctctacaacgtt
acccacaacagcttacgggcgcggtggcgcagcgtggatggcgcttccgggtacatggtc
ctctatgccccgctgtccgaggacggggcctccgacgagaaagaggtgaatgtgtccgag
gcggtgactgacctggagctggtgaccttggcgccggccacggagtacacagtgaccgtg
tacgccctttacggagaggaggccagtgaccccgtgaccaaccagaagaccactctgccc
ctgagcccgcccaggaacctgctgttcacggaggtggactacaactcggccagactgtcc
tgggacgctgccccagagaaggtgacaggataccgcatcatcaagacagacggggaacag
actgatgaggtagagataggtccagtaacgtcatggccactgaatgacctgaaggcacta
acagagtattcggtggccatctttgggatctatgatgagggtcaatcagaggcgcttttt
ggtagcttcaccaccgagcctgcgcctggacctcttgacctccgggctagtgagttcacc
acagacagcttccaggtcagctggggtcactctgctccggacattgccctgtacaaactg
acctgggctcctgttgacggagaggacatgagggagatggttctgaatggggatgtgaac
agtgttctgctcagtcccctaaaccctgacaccgagtatgaagtgatgctacaagctgtc
ttcaaagacgaatcagagagtgatgtcgtttcagtggtggaaagaacgctgaccaggaca
acaacggttgccaccacaacagcagcgatgcgccaggcagtgcaggatctgcgggttgag
ggagagaccacccacagcctggagctgttttgggagccgcaggatcctgtggtggatcag
taccgggtcacctacgtcagcctccggggagaccgtaaccaggagacggtcctggttcct
ggtcgtgagacctcagtccttctccagccgttgctgtctgacaccggctacaagctgacg
gtcacaccggtctaccaggacggacaggacggcgtcagtgagtccacggtgggccgaaca
ttgcccctgtcggcgcctagcaacctgagggtgtctgaggaatggtacaatcgcttccga
attgcctgggacatgcccccttcacccaccatggggtacagagtaatctaccaacccacc
tcagtgtctggtactgccctggagacatttgtgggagatgatgtaaacaccattctactg
gtgaacctgctgagtgacacggagtataatgtgaaggtcatcgcctcttacaccacagga
tccagtgaacccctctcaggcgtcgccaggacgttgaacctgggcgtggccaacctgaac
acctaccaggtgaggacgtccagcctgtgtgcccagtggaagcctcacagtcaagccagc
caatacagagtggtcatccagtctttgctaagcggtcaaaagcaggaagtaagtgtcagt
ggctctgcgtccagacagtgcttctatgacctgacgcccaacagccagtaccagatctct
gtttacacctggctgcaggacatggaagggcccgccgtcacaaccaccgccaccacacat
cccgccccaaccctgccgccgactccaccccctacgttgaccctcctaccgaccataccc
gctgccagggaagtctgcaaggcagccaaagctgacctggcgttcttggtcgatggctcc
tggagcatcggggacgacaacttccagaagattatccgcttcctttacagcactatgggg
gcactggatctgattggtccggacggcacacaagttgctatagcacagttcagtgatgat
gccaggactgagtttaaactgaactcttatgctaacaaggaagcgctgctcgatgccatc
cagcgcatcgcatacaagggaggaaacaccaagacaggtggagccatcaagcatgtgaag
gaggcaatcttcaccccagatggaggagtcagacggggcgtccccaaggtgctggtggtt
ctcaccgacggacgctcccaagacgacgtcaacaagatctccaaggagatgcagatggag
ggctacatcatttttgccattggctttgctgatgcggattatggagagctggtgaacatt
gccagcaaaccaagtgacagacatgtcttctttgtggacgatttggatgctgtcaagaaa
atcgaagagcagttgatcacgtttgtctgtgaggcggccactgccacttgtccgtctgtt
ctgatgagtgggaacacattggcaggcttcaggatgatggagatgtttggtctggtggag
aaagagtacggtgatgtgaagggagtgtccctagaaccaggctcctttaacagtttctcc
tgctaccgaatacacaaagatgccctggtctcacagcccaccaagtatctacatccagaa
gggcttccctctgactacaccatcaccatactgtttcgcctgctaccagagaccccccag
gagccctttgcattgtgggagatcctgaacaaggacaatgaacccctggtaggggtcatc
ctggacaatggtgggaagactctgacatttttcaactatgactacaagggagacttccag
actgtcacatttgagggtcctgacatcaagaagatcttctacggcagtttccacaaggtc
catgtaactgtcaccaaaaccacagccaggttggtgatcgactgcaaggcggtcggaggg
aagccgatcaacgcggcgggcaacatcaccacagacggggtggaagtgctgggccgcatg
gtccgctccagagggaacagagacaactcagcaccgttccagatccagatgtttgacatc
atttgcagcacttcatgggcaagccgagacaagtgctgtgagcttcccggactgagggtt
gaggaggactgtccggctatgccccatgcctgcacctgttcccaggacagcaaaggaccc
ccaggacccacaggacctccaggaggtcccggtatcagaggccccagaggagaccgagga
gaaccaggcaatgtgggacctcaaggtcttgtcggagaaataggtcctcctggaccgcag
ggcccccctggtccccagggcccaagtggacattccatccagggacaaccaggcggccca
ggtgaaagaggggagaaaggggaggtcggtgccccaggtccccagggtgggagtggctct
ccgggctccccaggaagagacggcgcggtgggacagaggggcctgcctgggaaagatggg
cctcagggacagcagggatcttcggggcccatgggtagtcctggagccccgggagcccct
ggtggaagtggctctcctggaccaatgggggaccaaggcccacctggccctgctggtacc
aaaggagaaaagggagaacgaggggacttgcagtcccaagctgctgtccgggccctcgct
cggcaagtgtgtgagcaactaattcagagtcacctgtcacgctacaactccgtcctgaac
cagatccccactcaggcagtttccgtaaggacggtaccagggcccccgggaaaccccggg
cgtactggcctcccagggccacagggagagcaggggcctccaggaagaccaggcttcccc
ggagccaacggacagaacggacgaccaggagagagaggcttcgccggggagaagggggag
aaggggagtcaaggtttggggacacagggccccagaggccccccggggccaccaggtatt
ccgggagagggtcgtacgggaagccaaggcccccctgggagaccaggcacccaaggcccc
ccaggccgaccaggcacccctggatccacaggccctgctgggcctgctgggtattgcgat
caaaactcctgtctgggctacaacgtcggaggaggccgggaacaggaatatgagaatgac
tactga
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