Esox lucius (northern pike): 105016620
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Entry
105016620 CDS
T04894
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105016620
Transcription factors [BR:
els03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105016620
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105016620
NCBI-ProteinID:
XP_010878864
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Position
LG16:complement(1532306..1553396)
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AA seq
298 aa
AA seq
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MYSMMMETDLHSPGPQTNTNSGQTGPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLMKKDK
YSLAGGLLSGGSGGAGMGLGAGMGSSGVGQRLESPGGHGGSSSSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGHHHHSHHHHPHNPQPMHRYDMTALQYSPISNSQGY
MSASPSGYGGITYTQHQSSGVSSSAAMGTLGSLVKSEPSSIQYDECHGGMSLDHHGDL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagacggacctccattcccctggaccccaaacgaacacaaat
tcgggtcaaacggggccgaacagtgggtccaaagcgaatcaggaccgggtgaagcgtccg
atgaacgcgttcatggtgtggtcccgcggacaacgcagaaagatggctcaggagaacccc
aaaatgcacaactctgagatcagcaagcggcttggcgccgaatggaaagtgatgtccgag
gcagaaaagagaccttttatcgatgaggcgaagcggttacgagctatgcacatgaaggag
cacccggattacaagtaccgaccgagacgaaagaccaagacgctgatgaaaaaggacaaa
tactctttggccggtggcctactctctgggggcagcggtggcgcaggaatgggtcttggg
gccgggatgggttcatccggtgttggccagcggttagagagcccgggcgggcatggaggc
tcctcaagctctggctacgcgcacatgaacggctgggcgaacggtgcgtactctgggcag
gttgctgcagccgctgcggccgcggcgatgatgcaggaggcgcaactagcttatagccag
catccaggcagtggccaccaccaccactcacaccaccaccacccgcacaacccccagccc
atgcaccgctacgacatgacggcgctccagtacagccccatctcgaactctcagggctat
atgagcgcctccccgtccggctacggcgggatcacctatacacagcaccagagctctggc
gtctcctcctcggctgccatgggcacgctagggtcgctggtgaagtcagagccgagcagt
atccagtatgatgagtgtcatggaggaatgtccctggatcaccatggagacctgtga
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