Esox lucius (northern pike): 105016714
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Entry
105016714 CDS
T04894
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105016714 (ddx27)
03009 Ribosome biogenesis [BR:
els03009
]
105016714 (ddx27)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105016714 (ddx27)
Spliceosome [BR:
els03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105016714 (ddx27)
Ribosome biogenesis [BR:
els03009
]
Eukaryotic type
Pre-60S particles
Helicases
105016714 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
PRK
Motif
Other DBs
NCBI-GeneID:
105016714
NCBI-ProteinID:
XP_010879036
UniProt:
A0A3P8YD54
LinkDB
All DBs
Position
LG17:6290890..6302337
Genome browser
AA seq
778 aa
AA seq
DB search
MLSDLDLVGTIQDHDDVPEEPDSESDDEAEQPIVLNKKKKALKQGHGAGDFSADFEFGEQ
DGLYSEDWAMADVMAQLKKRKAPTTLDEKIEKVRKKRKTEEKFGAKTTEKPVDPVKEAED
SEEEEEDDGEEDEEDEKPDVTQDGAEASDDEDEVDDEEEFTSGDEEVLTKADTVRDKGRK
KKKAEEPPEAFFADASAYDDQLMFPDMNLSRPILKAITAMGFKQPTPIQKACVPVGLLGK
DICACAATGTGKTAAFMLPVLERLIYKPKEAPVTRVLVLVPTRELGIQVHAVARQLAQFT
SVTTCLAVGGLDLKSQEVALRMGPDVLIATPGRLIDHLHNTPSFELSQIEILILDEADRM
LDEYFEEQMKEIIRMCAYQRQTMLFSATMTDEVKDLASVSLKQPVRIFVNSNTDVAPYLR
QEFVRIRPAREGDREAIVAALLTRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGN
LSQTQRLESLRRFKDEQIDILVATDVAARGLDIDGVKTVINFTMPNTVKHYVHRVGRTAR
AGKVGRSVSLVGELERKMLKDIVKKAKAPVKARVLPQEVILKFRDLIEKLEKDVYAVMRL
EKEERAMAHSEAQISVAQKRLTQKAEETNLQRTWFQTHDERKKERMTKALADFDLALRGK
KKREKFIKEGKKKELSPEDRAQFEILKSQMYAERSAKRDRKPKRARAMPADEPVQKGAKQ
KASKPGNPSVFDKELTNTSKKALKQYRAGPSFEDKKRLGISTNKKGGRFKSKAKFRRR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcagatttggacctggtcgggaccattcaagaccatgatgatgtgccagaggag
ccagattccgagtctgatgacgaagctgaacagccgattgtcctcaacaagaagaagaaa
gcattaaaacagggtcacggtgctggggacttcagtgctgacttcgagtttggagagcag
gatggactatacagcgaggactgggcaatggctgatgtgatggcacagctgaaaaaaagg
aaagccccgaccaccttggatgagaagattgagaaagtacgcaagaagcgcaaaacagag
gagaagtttggggcaaagacaacagaaaaacctgtggatcccgtaaaggaggcagaggac
tctgaagaggaggaggaagatgatggtgaagaggatgaggaagatgagaaacctgatgtc
actcaagatggggctgaggcatcagatgacgaagacgaggttgacgacgaagaggagttt
acatcaggcgatgaagaggttctcacaaaagcagacactgtgagagacaaaggcagaaag
aagaaaaaggccgaagagcccccagaggccttctttgctgatgcctcggcctatgatgac
caactcatgtttcccgacatgaacctctcccggcccattctgaaggctatcactgctatg
ggcttcaagcagcccactcccatccagaaggcctgtgtgcctgtggggcttctgggtaaa
gacatctgcgcctgtgcggctactggcaccggtaagactgccgcgttcatgcttccggtc
ctggagcggctgatttacaagcctaaggaagccccggtgacccgtgtgctggttctggtc
cctacccgtgagctgggcatccaggtgcacgctgttgcccggcaactggcccagttcacc
agtgtcaccacctgcctggccgttggcggtctggacctgaaatcccaggaggtggcgctg
cggatgggaccagacgtcttgatcgccacgccgggccgactgattgaccacttgcacaac
acgccttcctttgagctcagccagatcgagatcctgatcctggatgaggctgatcggatg
ctggacgagtactttgaggagcagatgaaggagatcatcaggatgtgtgcgtaccagaga
cagaccatgctgttttcggccaccatgaccgacgaggtgaaagacttggcatctgtttcc
ctgaagcagccagtgcgtatctttgtgaacagcaacacagacgtggcgccctacctcaga
caggagtttgtcaggattcgaccggcccgggaaggtgacagggaggccatcgtggccgcc
ctgctgacgcggacgttccaggaccacgtgatgctgttcacccagacgaagaagcaggcc
caccggatgcacatcctgctgggcctgatgggcctgaaggtgggagagctgcacgggaac
ctgtcccagacccagagactggagagcctcaggcgattcaaagatgaacagattgacatc
ctggtggccacagacgtcgcggccagaggcctggatatcgacggagtcaaaacggtgatc
aacttcaccatgccgaacaccgtgaagcactatgtccaccgggttggacgcactgcccgc
gccggcaaagtgggccgctccgtgtccctggtgggtgagctggagaggaagatgctcaaa
gacattgtcaagaaggccaaggcccctgtgaaggcccgagtcctgccacaagaggtgatt
ctgaagttccgcgacctgattgagaagctggagaaggacgtgtacgctgtgatgcggctg
gagaaagaggagagggccatggcccattcagaggctcagatcagcgttgcacagaagcgt
ctgacgcagaaagcagaagagacaaacctccagaggacgtggttccaaacgcatgacgag
cgcaagaaagagcgcatgactaaagctctggcagactttgatttggccctgagagggaag
aagaagagggaaaagttcatcaaggagggaaaaaagaaagagttgtcgccggaggacaga
gcccagtttgagatcctcaagtcccagatgtatgccgagcgttctgccaagagggaccgc
aaacccaaaagagccagggccatgccggcggacgagccagtccaaaaaggagcgaaacag
aaagccagtaaaccaggcaacccgtctgtatttgacaaggaacttacaaacaccagtaag
aaagcactcaagcagtacagagccggaccatcttttgaagataagaagaggttgggaatt
tcaacaaacaagaaggggggacgcttcaagtccaaggccaagtttagaagaaggtag
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