Esox lucius (northern pike): 105016828
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Entry
105016828 CDS
T04894
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
els
Esox lucius (northern pike)
Pathway
els04010
MAPK signaling pathway
els04020
Calcium signaling pathway
els04260
Cardiac muscle contraction
els04261
Adrenergic signaling in cardiomyocytes
els04270
Vascular smooth muscle contraction
els04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105016828
04020 Calcium signaling pathway
105016828
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
105016828
09153 Circulatory system
04260 Cardiac muscle contraction
105016828
04261 Adrenergic signaling in cardiomyocytes
105016828
04270 Vascular smooth muscle contraction
105016828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
els04040
]
105016828
Ion channels [BR:
els04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
105016828
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
PriCT_1
Motif
Other DBs
NCBI-GeneID:
105016828
NCBI-ProteinID:
XP_010879219
UniProt:
A0A3P8XR56
LinkDB
All DBs
Position
LG17:12318325..12346423
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AA seq
1829 aa
AA seq
DB search
MADSGGETNLQSLIMDEETLKRKQKEKLKKLLATGGNPRPARSLFFLTLKNPFRKAAINI
VEWKPFEIIILLTIFANCVALAVFLPMPDEDSNNTNTNLESLEYIFLIIFSIECFLKIIS
YGFLFHEGAYLRNCWNILDFVCVSVGLFAVIGDAITYISGVEAQPGEKGGGFDMKALRAF
RVLRPLRLVSGVPSLQVVMNSILKSMLPLFHISLLVFFMVTIYAIVGLELFKCKMHKTCY
YTGTNIIATVENEKPSPCAQAGNGRRCTINGTECRAGWAGPNNGITHFDNLGFAMLTVYQ
CITTQGWTDVLYWVNDAIGIEWPWMYFLTLILVGSFFVLNLVLGVLSGEFTKEREKGKAR
GEYTEMRETQQLDEDLKGYMEWITQAEVMDANGEGQGLLPLEDGESVAGSLKDMDTLQKI
MYYYKLARKWNLFFRRKCLVYVKSRMFHWWVIFLVFLNTLAIATEHHKQSQQLTDWQDTA
NKVLLSMFAIEMIMKMYAFGLQQYFMSLFNRFDCFVVSTGILELILVRMDIMTVMGISVL
RCIRLLRLLKVTKYWTSLSNLVVSLLNSTRSIACLLLLLFLFIVIFSLLGMQVFGGKFNF
PDRPKPRSTFDSFPQALISVFQILTGEDWNAVMYDGIMAHGGPTMPGILVSIYFIILFVC
GNYILLNVFLAIAVDNLAEAESLTMAQKEKSEEKKRKKLLRANMPDKATEEKALLAKKLA
AERAKIEGIPTTAKLKVDEFESNVNEIKDPFPPADFPGDDEEEEPEIPDTPRPRPMADLQ
LKEEVVPIPEASSFYIFSSQNKFRKVCHRIINATAFTNIILLFILLSSISLAAEDPIDPM
SFRNQVLASADVVFTSVFTVEVVLKMTVYGAIMHPGSFCRNSFNILDLIVVSVSLLSMLM
ESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAVKTIGNIVLVTMLLDFMFACI
GVQLFKGKFYSCTDPDKMTEEECKGNYIRYEEGALHPMTVHQRVWTNAELNFDNILEGML
ALFTVSTFEGWPKLLYKAIDSNMEDVGPIYNNRIAISIFFIIYIILIAFFMMNIFVGFVI
VTFQEQGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNKYQYNVWYIVTSCYFEYLMF
LLIMLNTMCLGMQHCNQSTHVTDLSDMLNVIFTVLFTVEMVLKLMAFKAKGYFGDPWNVF
DFVIVIGSVVDVILSEVDAALESSGGLYCLHGCAEVNPMQAIADSENARVSITFFRLFRV
MRLVKLLNRSEGIRNLLWTFIKSFQALPYVALLILMLFFIYAVVGMQIFGKIALIDGTHI
NRNNNFQTFPHAVLLLFRCATGEAWQEVMLACLYGKRCDPKSDYLPGEEYTCGASFAIIY
FMSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPEATGRIKHL
DVVTLLRRIQPPLGFGKFCPHRVACKRLVSMNMPLNSDGTVTFNATLFALVRTALKIKTE
GNFEQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDYFRKLKKRQ
EEYYGYRPTKKNATNEIQAGLRSIEEEATQELHRAISGDLMNEEDMDRAMEDAAEEAIFR
RAGGLFGNHIDSFAMEEGVHNHNATQVTSQRPLQMSRYDEEEMTSSPAYHANEDFFPTMP
NKTNNNNVNNNAGDSFPYETDDRVQVYTISTSRSPRDTADWDLQTVAGPSQDRRTPSPQQ
SQGPDSAFNKLIQEVLINGGLESLARDPRFVSVTKQEMAEAFNVDPVEMESSATEIMNGR
RERVATPPVRPPRRSQRNATQSATPSDLV
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagtggtggcgagacaaacctgcaatccttgattatggacgaggaaactctg
aaaaggaagcagaaggagaagctaaagaaactcctggcgacgggaggaaaccctcggcct
gcgcgctccctcttcttcctcacgctgaagaacccattccgaaaggctgccatcaacatt
gtggaatggaagccttttgagatcatcattctgctgaccatctttgccaactgcgtggcc
ctggccgtgttcctgcccatgcccgacgaggacagcaacaacaccaacaccaacctggaa
agcttggagtacatattcctcatcatcttctccatagagtgctttctaaagataatatcc
tatggatttctgttccatgagggggcatatctacggaactgttggaacattctagacttt
gtctgtgtgtctgtggggctgtttgcggtcatcggcgacgccatcacctatataagtggc
gtggaggcacagcccggggagaaggggggcggcttcgacatgaaggccctcagggctttc
cgagtgcttcggcccctgaggcttgtctctggagtccccagcctgcaggtggtgatgaac
tccatcctaaagtccatgctacctctgttccacatctccctgttagtcttcttcatggtc
accatctatgctattgtgggactagagctcttcaagtgcaagatgcacaaaacctgctac
tacacaggcacaaatatcattgccacagtggagaatgagaagccatctccgtgtgcccag
gctggtaacggccgtcgctgcaccatcaacgggacggagtgccgggcaggctgggccgga
cccaacaacggcatcacccactttgacaacctgggcttcgccatgctcacggtctaccag
tgcatcaccacccagggctggaccgacgtgctctactgggtgaatgatgctatcggtata
gaatggccctggatgtatttcctgacactcatcttggttggctccttctttgtgctgaac
ctggttctgggcgtgctgagcggggagttcactaaggagcgagagaaggggaaggcccgc
ggggagtacactgagatgagggagacccagcagctggacgaagacctgaagggctacatg
gagtggatcacccaggctgaagtcatggatgccaacggggaggggcagggcctgctccct
ctggaggatggagagtcagtggcaggcagtctgaaggacatggacacgttgcagaaaatc
atgtattactacaagcttgcacgtaaatggaacctgttctttcgacggaagtgtcttgtc
tacgtgaagtcccgcatgttccactggtgggtgatcttcctggtgttcctgaacacgctg
gccattgctactgaacaccataagcagtcccagcaactcacggattggcaagacacggcc
aacaaggtgctgctctccatgtttgccatcgagatgattatgaaaatgtacgccttcggc
ctccagcagtacttcatgtccctgttcaaccgctttgactgcttcgtggtctccaccggc
atcttggaactcatcctggtccgcatggacatcatgacggtcatggggatctccgtactg
cgctgcattcgactcctgcggctgctcaaagtcaccaagtactggacctctctcagtaac
ctggtggtgtccctgctgaactcaacacgctccatcgcctgcctgctcctcctcctcttc
ctcttcatcgtcatcttctctcttctgggcatgcaggtgtttgggggcaagttcaacttc
ccagaccggcccaaaccccgcagcacctttgatagtttcccccaggccctcatcagtgtc
ttccagatcctaacaggggaggactggaacgctgtgatgtatgacggcatcatggctcac
ggtggccccaccatgccagggatcctcgtcagcatctatttcatcatcctcttcgtctgt
ggcaactacatcctgctcaatgtcttcctggccatcgccgtggacaacctggcggaggcc
gagagtctgaccatggcccagaaggagaaatctgaggagaagaaacgcaagaagctgctg
agggccaacatgcctgacaaggccacggaggaaaaagcccttctggccaagaagctggca
gcggagagggctaagatagagggcatcccgaccacggctaagttgaaggtggatgagttt
gaatccaatgtgaacgagatcaaggaccccttcccaccggctgacttcccgggcgatgat
gaggaggaggagcctgaaattcctgacacaccgaggcccagaccaatggcagacctgcag
ctgaaggaggaggtggtgcccattcctgaggccagctccttttacatcttcagctctcag
aacaagttccgtaaggtgtgccaccgcatcatcaacgccacagccttcaccaacatcatc
ctcctcttcatcctcctcagcagcatctccctggctgctgaggaccccatcgaccccatg
tccttcaggaaccaggtactggcctctgcagatgtcgtcttcacctcagtgttcactgtg
gaggtcgtcctcaagatgacagtatacggggccatcatgcatcctggctccttctgccgg
aactcctttaatatcctggatctgatagtggtcagcgtatccctcctctccatgctcatg
gagtccagtgctatttctgtagtgaagatcctcagggttttgagggtgctgaggccccta
agggccatcaacagggccaagggcctcaagcatgtggtccagtgtgtctttgtggcagtc
aaaaccatcggtaacatcgtgctggtcactatgctgctggacttcatgttcgcctgcatt
ggagtccagctcttcaagggcaaattctactcctgcacagatcctgataaaatgacagag
gaagagtgcaagggtaactacatcaggtatgaggaaggcgccctacatccgatgacggtc
caccagagggtgtggaccaacgcagagctcaacttcgacaacatcctggagggcatgctg
gctctgttcaccgtgtccacgtttgaggggtggccgaagctcctctacaaggccatagac
tccaacatggaggacgtgggccccatctacaacaaccgcatcgccatctccatcttcttc
atcatctacatcatcctcatcgccttcttcatgatgaacatctttgtcggctttgtcatt
gtcaccttccaggagcaaggagagcaagagtacaagaactgtgagctggacaagaaccag
cgtcagtgtgtccagtacgctctgaaagcccggccgctgcgctgctacattcccaagaac
aagtatcagtacaacgtgtggtacatcgtcacctcctgctactttgagtacctcatgttc
ctcctcatcatgctcaacaccatgtgtctggggatgcagcactgtaaccagtcaactcat
gtgacggacctgtccgacatgctgaacgtgatcttcacggtgctcttcactgtggagatg
gtcctcaaactcatggccttcaaagctaagggttactttggagacccatggaacgtcttt
gactttgtcatcgtcatcggcagcgtagttgacgtcatcctgagtgaggttgatgcggcc
ctcgaatcttccggaggtctttactgtctccacggctgcgctgaggtgaacccaatgcaa
gccatcgcggactctgaaaacgcccgcgtgtccatcaccttcttccgacttttccgtgtg
atgcgtctggtgaaacttctgaaccgttctgaggggatccggaatcttttgtggaccttc
atcaagtctttccaggctctgccctacgtcgccctgctcatcctcatgctgttcttcatc
tacgctgttgtcgggatgcagatatttggtaagatagcgttgatagacgggacacacatc
aacaggaacaacaacttccagaccttcccccacgctgtgctgctgctcttcaggtgtgcg
acaggtgaggcgtggcaggaagtcatgttagcgtgtctgtatgggaagaggtgtgaccct
aaatcagactacctgcctggagaggagtacacctgtggagccagcttcgccatcatctac
ttcatgagtttctacatgctctgcgctttcctgatcatcaacttgtttgttgcggtcatc
atggacaactttgattacctgacccgtgattggtccatcctcggcccccatcacctggat
gagttcaagaagatctgggctgagtacgacccagaggccacggggcgtattaagcacctg
gatgtggtgactctgctacgtaggattcagcctcctctgggctttggaaagttctgcccc
cacagagtggcctgcaagagactggtgtcaatgaacatgcccctcaacagtgatggaaca
gtcacattcaatgctacgctgtttgctcttgtcaggactgcactgaagatcaagactgaa
ggaaactttgagcaggccaatgaggaactgagggccatcattaaaaagatctggaaaaga
accagtatgaagctgctggaccaggttatcccaccaatcggagatgatgaggtgacagtg
gggaagttctacgccaccttcctgatccaggactacttcaggaagttgaagaagagacag
gaagagtactatggctaccgccccaccaagaaaaacgccacgaatgagatacaggccggc
ctgaggagcatcgaggaggaggccacacaggagctgcatagagccatctcaggagacctg
atgaacgaggaggatatggacagagccatggaggatgcagcggaggaggccattttcagg
cgagcaggtggtctgtttgggaaccatatcgattccttcgccatggaggaaggagtccat
aaccataacgccacacaggtgactagccagcggcccctacagatgagccggtatgatgag
gaggagatgaccagctcacctgcctaccatgccaacgaggacttcttccccacaatgccc
aataaaaccaacaacaacaatgtcaacaacaacgctggagacagttttccttatgagaca
gatgacagggtccaggtctacaccatctcaaccagccgaagtcccagagacacagcagac
tgggacctccagacagtagcgggacccagccaggacagacggacccccagcccccagcaa
tcacagggcccagacagtgccttcaacaaactcatacaggaggtcttgataaacgggggg
ctggagagcttggccagggaccctcgctttgtgtcggtgaccaaacaggaaatggctgaa
gctttcaacgttgacccagtggagatggagagttctgccactgagattatgaacggtcgc
agagagagggtggccacacctcctgtcaggcccccccgcagatcacagagaaatgccacc
caatcagccacacccagtgatcttgtgtag
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