Esox lucius (northern pike): 105016885
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Entry
105016885 CDS
T04894
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
els
Esox lucius (northern pike)
Pathway
els04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105016885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
els02000
]
105016885
Transporters [BR:
els02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
105016885
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GFIT
Motif
Pfam:
SNF
UL148
Motif
Other DBs
NCBI-GeneID:
105016885
NCBI-ProteinID:
XP_010879322
UniProt:
A0AAY5KCX7
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Position
LG17:15075372..15085302
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AA seq
594 aa
AA seq
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MAVPQSVRRHGALPGLVQGNQHRVKERGHWDSKTEFILAVAGAIIGLGNVWRFPYLCYKN
GGGAFFIPYILYLVTCGIPLFILETALGQYTSQGGIICWKKICPLFEGIGYAALVITTYG
CMTYTVILAWAFFYLFSSFTADLPWANCNNAWNTDACVTFGTNNASSNWTVPLVNTSSSV
VEFWLWRVLRISNGIDSLGGIRWELALCLLLSWVICYFCIWKGIRSTGKAVYVTATFPYV
MLLVLLIRGVTLPGATDGIFYYLYPNITRLADPQVWMDAGTQIFYSYAICLGYLASLGSY
NTYNNNCYKDSFYLCLLNSGTSFVSGFAIFSILGYMAQDQGVDISVVAESGPGLVFIVYP
QAVSLLPCPQFWAVCFFTMIILLGVDGQFVGLESLVTSVTDVYPHLIRKGYRREILLLVF
CCCCYLVGLIMVTEGGLYVIQLFDHYVCSGATLLLMSICQSLSIGWIYGAERFCDNIEDM
IGYRPSSLLKYCLLYITPSVGTGTFIFSLLKYSPLKFNNTYVYPWWAYTLGWFLAMSSLS
LIPITMVYKLYRGNGSFCKRFKEICRPADDLPIMKKEMIRPYELDCATSDKTQH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcctcagtcagtacgcaggcatggggctctcccgggactggtgcagggcaac
caacacagggtcaaagagcgtggccactgggatagtaaaactgagtttattctagctgta
gctggtgctattattgggcttggaaatgtttggagatttccctatctttgttacaagaat
ggcgggggcgctttctttatcccatacattctgtacctggtgacctgtggcatccccctg
ttcattttggagactgctttgggacagtacaccagccaggggggcatcatctgctggaag
aagatctgcccgctgtttgagggaattggctatgctgccctggtaatcaccacatatgga
tgcatgacctacacagttattctggcgtgggctttcttctacctgttctcatcctttact
gctgacctgccatgggccaattgcaacaatgcctggaacacagacgcttgtgtgacattt
ggcaccaataacgcctctagcaactggactgttcctctcgtgaatacgtcgtcttctgta
gtggagttttggctgtggcgtgtgctacggatatcaaatggtattgattcattgggaggt
attagatgggagctggctctgtgtcttctgctgtcctgggtcatctgctacttctgtatc
tggaaaggaatcaggtcaacagggaaggcagtctacgtcacagccaccttcccctatgtc
atgctattggtgctattaatccgaggagtgaccctaccaggagctacagatggcatcttc
tactacttatacccaaatattacacgtctagctgatccacaggtttggatggatgcagga
acccagatcttctattcttacgccatatgcctgggctacctggcctctctcggaagctac
aacacatacaataacaattgctacaaggactccttttacctgtgcttgctgaacagtggc
actagctttgtgtccggttttgccatcttctccatactgggttatatggctcaagaccaa
ggagtggacatctctgtggttgccgagtcaggtccaggcctagtgttcatagtgtaccct
caggcagtctccttgctcccctgccctcagttctgggccgtctgcttcttcaccatgatc
atcctgttaggagtggacggacagtttgttggacttgagagccttgtgacctcagtaacg
gatgtctacccacacctcatcagaaagggctaccggagggagattctgctgctggtcttc
tgctgctgctgctaccttgtcggactgatcatggtcaccgagggtggcctatatgtcatc
cagctgtttgatcactatgtgtgcagtggtgccactctgctgctcatgtccatatgtcag
tcactcagtattggatggatatatggtgctgaacgcttctgtgacaacattgaggatatg
attggctacaggccctcctccctgctgaaatactgtttgctctacattaccccatctgtt
ggaacaggaacctttatattctctctgcttaagtacagccctcttaagttcaacaacacg
tatgtgtacccttggtgggcatacacgctaggctggttcctagctatgtcctccctgtct
ctcatccccatcaccatggtctacaaactctaccggggcaatgggtctttctgcaagcgc
ttcaaagaaatttgtcggccagcagatgaccttcctataatgaagaaggagatgatacgt
ccctatgagctggattgtgctactagtgataaaacgcagcactaa
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