Esox lucius (northern pike): 105016915
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Entry
105016915 CDS
T04894
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X2
KO
K14793
ribosomal RNA-processing protein 9
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
els03009
]
105016915 (rrp9)
Ribosome biogenesis [BR:
els03009
]
Eukaryotic type
90S particles
Other 90S particles
105016915 (rrp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
WD40_like
WDR54
Beta-prop_BBS7
Ntox15
Motif
Other DBs
NCBI-GeneID:
105016915
NCBI-ProteinID:
XP_010879384
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Position
LG17:complement(13737335..13744148)
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AA seq
481 aa
AA seq
DB search
MSSFFIKKKGPQKVFKKSDLPGSKRKNDGSTGNKLQKKMASKHNEEISSDSETESPAVHR
KRRANVEEEFDETPQEKKLRLAKLYLDQLRNEEEKKAEEESFESELIAGRLEEDVLEQKG
KLQRMVAKDLLPPDESEIRLLRGHKLPVTCLVISPDDKNVFSAAKDCSIIKWDVESGKRL
HTIAGGRKGTEDRHLGHTAHILCMSISSDGKYLATGDMNKLILIWEAATCKHLYKFTGHR
GPVSGLSFRRGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDVITGLDSGSRERCVTAG
GRDRTVRVWKIAEESQLVFHGHDGSIDCIQLINEEHMITGSDDGSVSLWNVNKKKPLSTV
KAAHGQHGDMGLEQPYWVSAVAALHNSDTVASGSHNSKVQLWKCGQGFRRLEPLFSVPVN
GFVNSLKFSSSGKFLVAGVGQEHRLGRWWSLKGVKNGLYIIPLKRQLSEKQDAPNAEEKT
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattttttattaagaaaaaaggaccgcaaaaggttttcaaaaagagtgattta
ccaggttcaaaaagaaagaatgatggaagcacagggaacaaactccagaaaaagatggct
tccaaacacaatgaagaaatttccagcgactctgaaacagaaagccctgcagtgcacaga
aaaagaagggccaatgtcgaagaagagtttgatgagactccacaggagaaaaaactacga
ttagccaaactttaccttgaccagttgaggaatgaggaagaaaagaaggcagaggaggag
tcctttgagtctgaactaatagctggaagacttgaagaagatgtgctagagcagaaagga
aagcttcaacggatggtagcaaaagacctcctgccgccagatgaatcagagattcgcttg
ttgagaggccataagctgccagtgacctgtctggtcatctctcccgatgacaagaatgtc
ttctcggctgccaaagactgctccatcatcaaatgggatgttgaaagtggtaagagactg
cacacgatagctggtggcaggaaaggaacagaggatcgtcatttaggtcatacggcacac
atcctgtgcatgtccatatcatcagatggcaaatacctggcaacaggagacatgaataag
ttgatcttgatttgggaggccgcaacttgtaaacacctgtacaagttcacaggccacaga
ggccctgtatcgggcctatccttccggagaggaacccacgacttgtacagtgcctctcat
gaccgctccatcaaggtgtggaatgtagacgaaaacgcctatgtggaaaccctgtttggt
caccaggatgtgatcacagggctggacagtggaagccgggagcgctgtgtgactgcaggg
gggagggaccgcactgtgagggtgtggaagattgcagaggagtcccagctagtgttccac
ggccatgatggctccattgactgtatccagctgatcaacgaagaacacatgataacaggc
tctgatgatggctctgtgtccctgtggaacgtgaacaagaagaagcccctcagcacggtg
aaggcagcccatggtcagcatggggacatggggctggagcagccctactgggtgtcagct
gtggcagctctgcataactctgacactgtagcctcaggttcccacaactctaaagtgcag
ctgtggaagtgtggccagggtttccgtcgcctggagcctctcttcagtgttcctgtgaat
ggttttgtcaacagtcttaaattttccagttctgggaagttcctggtggcaggagtaggt
caggaacacaggctcggccggtggtggtcactcaagggtgttaagaatggactctacatt
attcctctcaaaagacaactgtcagagaagcaggatgctccaaatgctgaagagaaaacg
gagtag
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