Esox lucius (northern pike): 105016937
Help
Entry
105016937 CDS
T04894
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105016937 (ctr9)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
105016937 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_8
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
ARM_TT21_5th
TPR_6
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
105016937
NCBI-ProteinID:
XP_010879437
UniProt:
A0A3P9A6Z0
LinkDB
All DBs
Position
LG02:complement(25049901..25062293)
Genome browser
AA seq
1165 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQTKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVL
LYLARALFKCGKLQDCKQTLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALASTEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQDQERDFLRQQMQKEQEEKRTKQEEDQKKLLEQRAMYVEKTKNLLSFADGMKEERK
EKKKGGGRRKKGGDFDEFVNDGSDEDLPVRRKKKRKAGSGSEEEGEDGEKKSRKKRRRPT
KRGGDGSDEEEGGSRGKKQRKPRMGGKKIQRAEPVPPSLKGKIKSKAIISSSDSSSDEDG
LKIAEDRNPRDSGSGSDDEGGHKKRIASDSESDGGRKRSGSEAGSLHRSGNSGSDSGSDP
GSDRPVKRRRVQQQSDSEQSDNESKRSRSGSEDESRPGSAVAASGSEAGSPAGSPVGSPR
HSDNGSEPDGSANEASNHGSGSDSD
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggttcaattgaaatccccttacgggacacagatgaggttattgagcttgat
tttgaccagctgccagaaggagatgaggtcatcagtatcctgaaacaggagcatacacag
ttgcatatatggattgctcttgctctggagtattacaaacagacaaagacagaggacttt
gtcaagttgctagaggcagcccgtatcgatggaaacctggactacagggaccatgagaag
gaccagatgacctgtctggacaccctggcagcctattatgtccagcaggcacgcaaagag
aagaacaaagatgccaagaaggagctcatcacccaagccaccctgctctacaccatggca
gacaagatcatcatgtacgaccagaaccacttgttgggaagagcatgtttctgcctgctg
gagggggataaaatggaccaggccgatgctcagttccactttgtattgaaccagtctacc
aataacatccctgctcttcttggtaaggcttgcatctcctttaataagaaggattacagg
ggagcgttggcctactacaagaaagctttacgcacaaaccctggatgccctgctgaggtg
agactggggatgggccattgttttgttaagctgaataagctggagaaggctcgtcttgct
tttggccgggccctggagctcaactccaaatgtgtgggagcccttgtgggcttggctgtg
ttggagttaaacagcaaggagcctgactccatcaagaacggagtgcagctcctctccaga
gcatacaccattgaccccagcaaccccatggtgctcaaccatcttgctaaccactttttc
ttcaaaaaggactacagtaaagtgcagcacttggctctacatgcctttcacaacacagag
gtggaagcaatgcaggctgagagctgctaccagttggcccgctcctttcatgttcaggag
gactatgaccaggccttccaatactactaccaagccacccagtttgcctcgtctacgttt
gtgttgccttttttcgggctgggtcagatgtatgtgtaccggagagacaaggagaatgca
gctcagtgctttgagaaggtccttaaggcctaccccaacaactatgaaaccatgaagatc
cttggctctctctatgctacttcagatgaccaggaaaagagagacatcgccaaaggccac
ctgaaaaaagtgacggagcagtaccctgatgatgtggaggcctggatcgagctggcccag
atcctggagcagactgacatccagggtgccctctctgcctacggcacggcaacccgcatc
cttcaggagaaggtccaggccgacgtcccacctgagatcctcaataacctgggggctctc
cacttcagactggggaacctgggagaggccaagaaatacttcctggcctctttggagaga
gctaaagctgagggtgagcatgacgagcattactacaacgccatctccgtcaccacctcc
tacaacctggcccgactctacgaggccatgtgtgagttccatgaggccgagaaactctac
aagaacatcctgagggaacatcccaactacgtcgactgttacctgcgtcttggggcaatg
gcacgcgataaaggcaacttctatgaagcttccgattggttcaaagaggctctgcagatt
aatcaggaccacccagacgcctggtccctgattgggaacctccacttggccaaacaggag
tggggtccgggtcagaagaagtttgagcgtatcctgaagcagccgtccactcagaatgac
acgtattccatgttggccctgggcaatgtgtggctacagacccttcaccagcccaccagg
gaccgcgagaaggaaaagaggcatcaagaccgagcgctggccatttacaaacaggtcctc
cgaaacgactcgaagaacctctacgctgccaacggcataggtgctgtactggcccataag
ggctattaccgtgaggcccgtgatgtgttcgcccaggtgagggaggccacagctgacatc
agcgacgtctggctcaacctggcccacatttacgtggagcagaaacagtacatcagtgct
gttcagatgtacgagaactgtctgaagaaattctacaagcaccagaacacagaggttctg
ctgtacctggctcgggccctcttcaaatgcgggaaactgcaggactgcaaacagactctt
ctgaaggcgcgccacgtggcccccagtgacacagtgctgatgttcaacgtggccttggta
ctgcagaggctggccactctggtgctgaaggacgagaagagcaaccttaaggctgtcctc
agtgcagtcaaagagctggagctggcccaccgttattttagctacctcagcaaggcaggg
gacaagatgaggttcgacctggcgcttgcctctactgaggccaggcaatgctctgacctg
ctcagtcaggcccaatatcatgtggctcgtgcccggaagcaggacgaggaggagaaggag
ctccgggccaagcaggatcaggagagggacttcctgcgtcaacagatgcagaaagaacag
gaggagaagagaaccaagcaggaagaggatcagaagaagctgctggagcagagagccatg
tatgtggagaagaccaagaatctgctgtccttcgccgacggaatgaaggaggaaaggaaa
gagaagaagaaaggaggcggccggcgcaagaaggggggtgactttgatgagtttgttaat
gacgggtctgatgaggatctgccagtgaggcggaagaagaagcgaaaggctggaagcgga
agtgaggaggagggcgaggatggagaaaagaagtcccgcaagaagaggaggagacccacc
aaacggggaggcgatggcagtgatgaggaggagggtggctcccggggcaaaaagcaacgc
aaaccccgaatgggtggcaagaagatccaacgggccgagcctgtgccaccttctctcaaa
ggcaagatcaagtcgaaagccattatctcatcttccgactcctcatcagacgaggatgga
ctgaaaatcgctgaagaccgaaaccccagagacagtggttctggctctgatgacgagggt
ggtcataagaaacgcatcgcttcggacagtgagtctgatgggggaaggaaacgctctggc
agcgaggccggaagcctccatcgatctgggaactccggtagcgactctggcagcgaccca
ggcagcgaccgtcccgtaaagaggaggagagtgcagcagcagtctgactcagagcagtct
gataacgagagcaagaggagccgctctgggtcggaggacgagtcccgaccaggctcagcg
gtcgccgcttctggctctgaagcgggctctccggcaggctcccccgtgggttccccacga
cactctgataatggatcagaacctgatggttctgcaaatgaggcctccaaccatggctct
ggctctgacagcgactga
DBGET
integrated database retrieval system
