Esox lucius (northern pike): 105017198
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Entry
105017198 CDS
T04894
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174 isoform X1
KO
K25178
coiled-coil domain-containing protein 174
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105017198 (ccdc174)
03041 Spliceosome [BR:
els03041
]
105017198 (ccdc174)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105017198 (ccdc174)
Spliceosome [BR:
els03041
]
Complex C
Other components
EJC/TREX
105017198 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
105017198
NCBI-ProteinID:
XP_010879905
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Position
LG17:complement(20822006..20828990)
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AA seq
649 aa
AA seq
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MDRKKKQYEVTASSLVDLKAELYRKQEQFKHDKLEQDAGASVKSKFKIKKPNQWKQNEGV
SERAQKDEEQMTEEDKSLDMAKRKLEEKAKLYEQMTKGDFPDEETEALFLVDFTQKIIDK
KRENHTQQESEREDRESSSPIPPPENPDEEWVDYVDGLGRSRRCLKKDLPRFQKMNREFQ
GKGRDPAEKDLLSEDMRRELQRQEWEREEEEAMNRPVGPIHYEDIREQEARELGVGYFAF
SQDQEQRRKQRETLDMLRDQTTDQRSKREQLKEKRKTMLDARLAKVRQRKMKKSKLDGPE
GNPGTEHNQAEEDLIGPLPPSDEGGEKAPVVKKVEVEIQERRDTKPGVPHVREWDRGKVD
FFGEWTSRRRDERETEFAPPSTYFSDDKKQGFRKGAKWEQDKPKMAFKWSEALGGGRKET
LLPQDKPKGSSVPQLQPESVPVPKPSTPVPSEPQPTPCPSLTQNTVQPQKASTDPHCPSQ
PAQPEYTPPLPQNPATLPAQTQYTPPLPQNPATLPAQPQYTPPLPQNPATLPAQPQYTPP
LPQNPATLPAQPQYTPPPPTQTQFVSPFQHQFAPPHFHPQYPPPPHLPYSAPPQYPLQFL
PQYPPQYLPQYPPQYLPQYPPQPQSQCPPQPQPSDQSLDDMLAFYKNSV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaagaaaaaacaatatgaagttactgcttcatctcttgttgatcttaaagca
gaactctacaggaagcaagagcaattcaaacatgacaaactggagcaagatgctggggct
agcgttaaatccaaatttaaaatcaagaaacctaatcaatggaaacagaatgaaggtgtt
tcagagcgggcacagaaagatgaggagcagatgacagaggaagacaaaagtctagacatg
gcaaagcgcaagctagaggagaaggccaaactgtatgagcagatgactaaaggagacttt
cctgatgaggagacagaggcacttttcctggtggatttcacccagaagattattgacaag
aagagagaaaatcacacccaacaggagagcgagagagaggaccgagagagctcttccccc
atccccccacctgagaacccagacgaggaatgggtggattatgtggatggtttgggacga
tcccggagatgcctgaagaaagacttacccagattccagaaaatgaaccgagagtttcaa
ggaaaaggacgtgacccggctgagaaggacctgttgtcagaagacatgcgtcgggaactg
cagaggcaggagtgggagagggaagaggaggaggccatgaacagacccgtgggaccaatc
cactatgaggacatcagggagcaagaggcccgtgagcttggtgtgggatactttgccttc
tctcaggaccaggaacaacgtaggaagcagagagagactctggacatgctcagagaccag
acaacagaccagcgcagtaagagggaacagctgaaggagaagaggaagactatgctggat
gctcgacttgccaaggtgaggcagaggaagatgaagaagtctaagctggacgggcctgaa
gggaacccgggaactgaacacaatcaagcagaggaagacctgattggtcccctgcctccc
tccgatgaaggcggtgagaaggctcctgttgtgaagaaggtggaggtggagatccaggag
aggagagacaccaagcctggagtcccccatgtccgggagtgggacaggggcaaagtggac
ttttttggtgagtggacaagtcgtcggcgggacgagagggagacagagtttgcccctcct
tccacgtacttcagcgacgataagaaacagggcttcaggaaaggggccaaatgggagcag
gacaaacctaaaatggccttcaagtggtcagaggccctgggtggagggcgtaaagagaca
ctcctgccacaagacaagcccaaaggttcttctgtaccccagcttcagcccgaaagtgtc
cctgtgcccaagcctagtacccctgtaccctctgaacctcaacccacaccatgcccttct
ctcacccaaaacactgtccaaccacaaaaagcttcaacagaccctcattgcccatctcaa
ccagctcaacccgaatacacaccgcctctacctcagaaccccgctaccctacctgcccaa
acccaatacacaccgcctctacctcagaaccccgctaccctacccgcccagccccaatac
acaccgcctttacctcagaaccccgctaccctacccgcccagccccaatacacaccgcct
ttacctcagaaccccgctaccctacccgcccagccccaatacacaccgccaccaccgaca
caaactcagtttgtttccccgtttcagcaccagtttgcacctccacactttcatccccag
tatcctcctccaccacaccttccatattcagccccaccccagtaccctctgcaattcctc
ccacagtacccaccgcagtacctccctcagtatcctccccagtacctccctcagtatcct
ccccagccccagagtcagtgccctccccagccccaaccctccgaccaaagcctggatgac
atgctggccttctacaagaattctgtttga
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