Esox lucius (northern pike): 105017268
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Entry
105017268 CDS
T04894
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
els03036
]
105017268 (chd5)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105017268 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHD-1st_NSD
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
Prok-RING_1
AAA_22
Motif
Other DBs
NCBI-GeneID:
105017268
NCBI-ProteinID:
XP_010880015
LinkDB
All DBs
Position
LG17:24766182..24814364
Genome browser
AA seq
2077 aa
AA seq
DB search
MPGSLSNEDDGQDDMDFEDEIPGPNWHSRTLMQSRSPSLMQGLLDLKNDIEQIETHQTRQ
HSSSLQLSNFDDSEAQRKTVPLTPLESFFDDTLKQQKKKKPKKMEGKMPKVKKRKKEGGG
GVGVGVGSSEPEGQASEREDDHPLQRPEMGSESESSTYAPVPNTKKKKKPREKKEKKSKR
KKREEEDDDDDDDDDGSNKEPKSSSQLMKEWGLEDVQYGFTEEDYTTLTNYKAFSQFLRP
LIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVAAAVAAAVEMVTVAPSISVKE
ITSLPSCQPGAVRKAKTKDGKGPGVRRKTKSVKEVKKKSKGKKNKSKKKASSSEEDFGLE
ESDFDDVSIHSASVRSDTSGNAKKKARKGHKKRKREDGDGYETDHQDYCEVCQQGGEIIL
CDTCPKAYHLVCLEPELEKAPEGKWSCPHCEKEGIQWEAKDDDDEEEVAVEEEDDHLEFC
RVCKDGGELLCCDTCPSSYHIHCLNPPLPDIPNGEWLCPRCMCPPLKGKVQRILHWIWGD
PPLPAEVPPGPDGETVGQLVKPPLKGHPERELFVKWTGLSYWHCSWVSELQLELYHTVMY
RNYQRKNDMDEPPPYDYGSGEDELNNEKRKSKDPQYAAMEERFYRYGIKPEWMVIHRILN
HSYDKDGDVHYLIKWRDLPYDQCTWEVDDFDVPDYDNAKHSYWDHREQMIGDDQRPLVVR
KGKKGKEEEKRREREIPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEGLNWLRFSWAQ
GTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYV
VTYTGDKESRAVIRENEFTFEDSAVKTGRKVFRMKKDTAIKFHVLLTSYELITIDQTILG
SINWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPER
FNNLDGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQK
KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGN
QLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG
LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI
GQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGT
EELFKDEMEAAARAMGSHQKLCKNNGDIKEGDEGSVIHYDDNAISKLLDRSQNATEDTEI
QNMNEYLSSFKVAQYVVKDEDAEEEPQREIIKQEENVDPDYWEKLLRHHYEQQQEDLARN
LGKGKRIRKQVNYNDTSQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQL
KSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKS
EKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV
NGKYSTPDLIPSGLELKKLTESLSSDPNTPVQSSPAATPQPPGTPVPTEKTDLISGPADE
KDPIEQEPKKLPELEIPVSTDSSSQEERTDNTADIDETVNGSREDKPVTSEDSERTDASL
IDVTEPSCNAKEPQSKQTEMPSSQISPKTEPCQETDKPSAKCDSDPAIAKPVETELKPAL
SDEAKSEDLLMPEGRLNGEKEVHDEMEEVRRESLEKNGFKMRFMFNIADGGFTELHTLWQ
NEERAAVSSGKMYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFRTEMHKGN
YLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQ
HLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSIL
SRLTSRGNEPPPQQPFGQGSFACSQMYSTGFGGSFRGPAGGAMVNYSQMPLGPYVSVSNG
PPPPSSHLDKKSVDPLRDAATPDLKSGKPSDVICIED
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtcgttaagcaacgaagacgatggacaagacgacatggatttcgaagacgaa
ataccaggcccaaactggcattccaggacacttatgcagtcaagaagtccatcattgatg
cagggattgcttgatttaaagaatgacattgaacaaatcgagactcatcagaccaggcaa
cattcttccagtcttcaactgtccaattttgatgacagcgaggctcagcgtaaaactgtc
ccactcacacctctggaaagcttctttgacgacaccctcaaacaacaaaagaagaagaaa
cccaaaaagatggagggcaagatgccgaaagtcaagaaaaggaaaaaggagggaggaggt
ggagtaggagtaggagttggcagcagtgaaccggaggggcaagcttcagagcgggaggat
gaccatccactgcagcgtccagagatgggctcagagagcgagagcagcacctacgctcct
gtccccaacacaaagaaaaagaagaagcctagggagaagaaggagaagaaatccaaacga
aagaaaagagaggaggaggatgatgatgacgacgacgatgatgatggaagtaataaggag
cccaagtcgtccagccagctgatgaaggaatggggtctggaggatgtgcagtacggcttc
acagaggaggattatacaactctcaccaactacaaggccttcagccagttcctcaggcca
cttattgcaaagaagaaccctaaaatccccatgtctaagatgatgacggtgctaggggcc
aaatggcgagagttcagtgccaacaaccccttcaagggaacatcagcaacggcggtggcc
gccgcagtggccgccgcggtggaaatggtcacggtcgccccatccatctctgtcaaagag
atcaccagtctacccagttgtcagcctggggctgtcaggaaagccaaaaccaaagatggg
aaggggcctggagttcgacggaaaactaaatctgtgaaagaggtgaagaaaaaaagtaaa
gggaagaagaacaaatcaaagaagaaagcgtcttcgagtgaggaggactttgggctggag
gagtcagactttgatgacgtcagcatccacagtgcctctgtgcgctctgatacctcagga
aatgccaagaagaaagcccggaagggtcataaaaaaaggaaaagagaggatggggatggc
tatgagacagaccaccaggattactgtgaagtgtgccaacagggaggggagatcatcctg
tgtgacacctgtcccaaggcctaccacctggtgtgtctggagcctgagctggagaaggcc
cccgagggcaagtggagctgcccccactgtgagaaggagggcatccagtgggaggccaaa
gacgacgatgatgaggaggaggttgcagttgaggaagaggatgaccacctggagttctgc
agagtgtgtaaagatggaggggagctgctgtgctgtgacacctgcccgtcctcctaccat
atccactgcctcaaccctcccctgcccgacatacccaatggggaatggttgtgcccacgc
tgcatgtgcccaccactgaaggggaaggtgcagagaattcttcactggatatggggggat
cccccgttacctgctgaggttcccccgggccctgatggagagacagtgggccaactagtc
aagccccccctgaagggacacccggaaagggagttgtttgtcaaatggactggtctctcc
tattggcactgctcctgggtcagtgaactgcagttggagctgtaccacacagtaatgtac
cgaaactaccagcgcaagaacgacatggacgagccccctccgtacgactatggctctggt
gaggatgagctgaacaatgaaaagaggaagagtaaagaccctcagtatgctgctatggag
gagagattctaccgctacggtatcaagccagagtggatggtcatccacaggatcctcaac
cacagttatgacaaggatggggatgtgcactacctgatcaagtggagagacctgccttat
gaccagtgtacctgggaggtggatgactttgatgtccctgattatgataacgccaaacac
tcctactgggaccacagggagcagatgattggtgatgaccagcgccccttagtggtgaga
aagggaaagaagggcaaagaagaggagaagagaagggaacgagaaatccctcctgacgct
ccaattatagatcctaccatcaagtttgaacatcaaccctggtacatcaatgccactggg
ggcaccttacacccgtaccagctggaaggtctgaactggctgcggttttcctgggcacag
gggacagacactattctggcagatgagatgggcctgggcaagactgtccagaccattgtg
ttcctctactcactctacaaggagggtcattccaaaggtccatatctggtcagtgccccc
ctatccacgataatcaactgggagagggagtttgagatgtgggccccagacttctatgtg
gtcacttacactggagacaaagaaagtcgagcagtcatcagggagaatgagtttactttt
gaggacagtgcagtcaagacaggccgcaaggtcttccgtatgaagaaagacactgccatc
aagttccatgtgttgctgacatcatacgagctgatcaccattgatcagacaattctgggc
tcaattaactgggcctgccttgttgtggatgaggcacacagactgaaaaacaaccaatca
aagtttttcagaatcctcaatgggtataagatctactataagctgctgttgactggcact
cctctacagaacaacttggaagagctgtttcacctgctcaacttcctaactccagagaga
ttcaataaccttgatggatttctggaggagtttgctgatatctccaaggaggaccagatc
aaaaagctgcatgaccttctgggccctcacatgctcaggagactcaaagcagacgtgttc
aaaaacatgccttcaaagacagagctcattgtacgagtcgagctcagtcccatgcagaag
aagtactacaagttcatcctgacgcggaactttgaggcgctcaactccaagggtggtggc
aaccaggtgtccctgctcaacatcatgatggacttgaagaagtgctgcaaccacccctac
ctgttccctgtggcagccgtggaggcaccagtgttacctaatggctcttatgatgggaac
cagcttgtcaagtcctcaggcaaactcaccctacttcaaaagatgctaaagaaactcaaa
gatgaaggacacagagttctcatcttctcccagatgacaaagatgctggatctgcttgag
gactttctagaatatgagggctacaaatatgaacgcattgatgggggaattacaggaggc
ctacgacaggaggccattgaccgtttcaacgcaccgggcgctcagcagttctgctttctg
ctctccacccgagctggaggccttggcatcaatctggccacggctgacaccgttatcatc
tacgactcagactggaaccctcacaacgatatccaggcgttcagcagggcccaccgcata
ggtcagaataagaaggtgatgatctatcgctttgtgacacgagccagtgtggaggagcgg
atcacgcaggtggccaagaggaagatgatgttgacccacctggtggtgaggcccggcttg
ggctccaagactggctccatgtccaaacaggagctggacgacatcctgaagttcgggaca
gaggagctctttaaggacgagatggaggcagctgctcgggccatgggttcacaccagaaa
ctgtgtaagaataatggggacattaaggaaggagatgagggcagtgtgatccactatgat
gacaatgccatctctaagctgcttgaccgtagccagaatgccacggaagacacagagata
cagaacatgaatgaataccttagctccttcaaggtggcccaatatgtggtcaaagacgag
gatgctgaggaggagccccagcgggagatcattaagcaggaggagaatgtggacccagac
tactgggagaaactcctcaggcatcactatgagcagcagcaggaggacctggccaggaac
ctgggcaaaggcaaacgaatccgcaaacaggtcaactacaacgacacctctcaggaggac
caagagtggcaggatgatctttcagacaatcagtccgagtactccgtggggtccgaggac
gaggacgaagatttcgaggagagaccggaaggtgggcgcaggcagtctcgcaggcagctg
aagagtgacagggacaagcctttgccacccttgctggcacgtgtagggggcaacattgag
gtgctggggttcaacgcccgacaacggaaagccttcctcaacgccataatgcgctggggc
atgcctcctcaggacgccttcaactctcactggctggtcagagacctgcggggaaaaagt
gagaaagagttcagagcctacgtgtcactgtttatgagacatctttgtgagccgggtgca
gacggggcagagacctttgcagacggggtcccacgagaggggctctcccgccagcatgtc
ctcactaggatcggggttatgtctctggtcaggaaaaaggtccaggagtttgagcatgtc
aatgggaagtacagcactccagacctgatcccaagtggactggagctgaagaaactgacg
gagagtctgtcctctgatcccaacacccctgttcagtccagccccgcagccacaccccag
cctcctggaactcctgtcccaacagagaagacagatttgatctcagggcctgccgatgaa
aaggaccccatagaacaagagcccaagaagctaccagaactggagattccagtcagtaca
gactcatcttctcaggaagagaggacagataacactgctgacattgatgagacagtgaac
ggcagtagagaggacaaaccagtcacttcagaggacagtgaaagaacagacgcatcattg
atagatgtgacagagccatcctgcaatgctaaagagcctcagtccaaacaaacagagatg
ccatccagtcaaatctcaccaaaaaccgagccatgtcaggagacagataagccttcagct
aaatgtgacagtgaccctgccatagccaaaccggttgagactgaactgaagccagcgctt
tcagacgaagcaaagagtgaggacttgctaatgccagagggacggctgaatggagagaag
gaagtgcatgacgagatggaggaagtccggagggaatcactggaaaagaacggcttcaag
atgaggttcatgttcaacattgctgacggaggcttcacagagctgcataccctgtggcag
aatgaggagcgagctgcggtgtcatcagggaagatgtatgacatctggcatcgtcgccac
gactactggctgttggcaggcatcgttacacacggctatgcccgctggcaggacattcag
aacgacccacggtatgccatcctcaatgagcccttcaggaccgagatgcacaagggtaac
tacctggagatgaaaaacaagttcttggctcgtcgctttaagctgttagagcaggctctg
gtaatagaggaacagttaagaagggcagcatacctgaacatgacccaggacccaagccac
ccagccatggccctgaacactcgctttgctgaggtggagtgtctggcggagtcccaccag
cacctgtccaaggagtctttggctggcaataagccagccaatgctgttctgcacaaagta
ctgaaccagctggaggagctgctgagtgatatgaaggcggatgtgacacggcttcccaac
atgttgtcccggatccctccggtgtcagcccgtctgcagatgtcagagaggagtatactc
agccgcctaaccagccgcggaaatgaacctccgccacaacagccatttggccagggatcc
tttgcctgttcccagatgtatagcactggctttgggggcagcttccgggggccagcagga
ggagctatggtcaattacagccagatgcccctgggaccctacgtcagtgtgtccaatggc
cccccacccccctctagccacctggacaagaaatctgtggaccccctgagggatgccgcc
acccctgacctcaagtcaggcaagcccagtgatgtaatctgtattgaagattag
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integrated database retrieval system
