Esox lucius (northern pike): 105017326
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Entry
105017326 CDS
T04894
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
els
Esox lucius (northern pike)
Pathway
els04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105017326 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105017326 (scarf1)
Membrane trafficking [BR:
els04131
]
Endocytosis
Phagocytosis
Scavenger receptors
105017326 (scarf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_Teneurin
EGF_TEN
EGF_2
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
105017326
NCBI-ProteinID:
XP_010866129
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Position
LG01:complement(16056123..16063698)
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AA seq
954 aa
AA seq
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MGLFLTGLGLLLCCSVSSSHRLTPSGKNVCQDLRDPSTLVCCTGWRRQGEECTIPVCDGE
RTCQLDEVCVYPGVCRCRPGYYGAHCKTRCPPEFWAPDCRELCKCHPHGRCDPVTGKCTC
LPNRWGPLCENACQCGLHGHCHASDGNCTCDEGWWTPTCAKQCQCYPGTSTCDPLTGRCH
CSMGYWGPRCNRRCSCFVSPCQQKTGVCECQNGWWGPMCDRRCNCNLSHSQCDPASGDCL
CHPGYKGKFCNDPCGPGEHGSGCRLSCGHCKGGQSCSAVDGVCLACEPGWNGTRCDQPCP
HGYHGDHCQEACPRCRNSEPCDPRTGVCSHCEPGWTGPRCDEPCSNRTFGDGCRFLCNPC
FHGHCDHMTGSCVCGPGFQGESCNSTCPDHLYGFNCTSICDCGEGVSCHPATGDCPFSGH
RALIAGLLFPLLLALLCLLCCCCCCGGPTDGKDRVAVGDGGTSVRVKHHVYNVMANVSSA
VPCFSVWSSGLPRVTVSHHDPELTFNHSFIEPPSSGWVTDGSSFDSDEETGEALYCVPPR
EDIPAVAGGEFQEFQHEMTSKCNIFPDPSSFSVSGEDISLPFGIPRTSSIAKSKRPSVSF
AEGTKKSHPRFSPKERCGSNHDLTPGAPRPKPKSPWGVLALSALQAQGGKTLEGDVAAET
KGEVDEAGRGTGPLDEPGSSNEAGDPEADRFTVTPSRAVSGLPSGAALGRRRTLSNAAFT
RKGSQTTDSSTDAQLAELNNGVDKVTTVYVTVGKAGVGRPVSKLESPTSEGPVQAILRRL
GSLQRHKDQEVGTKLKGKSLGAEGITKPPRRKLGVRASVWEQRSPEVGSQADEGVAMRKP
SRRKQHTPHSSPADMGNTDAGTDTHPPPEGATATATPRRPLSSILMSVPEVDGSEVRGED
GKPSMQTENGYLLVGPPGVLTDSVSLSEVITNKGVVTSEGDEPNLYENVQIMHS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgggcctttttctgactggtctaggactactgctgtgctgttccgtctcctcctctcac
agactgaccccctcagggaaaaacgtctgccaggacctcagggatccctccacactggtc
tgttgtactggatggcgacggcagggcgaggagtgtacgatacctgtgtgtgatggagaa
cggacctgccagctggatgaggtgtgtgtgtacccaggtgtctgtcgctgtcgtcctggc
tattatggagcccactgtaagacgcgctgtcctccagagttctgggccccagactgtcgt
gagctctgcaagtgtcaccctcacgggcgctgcgaccctgtgacaggcaagtgcacatgc
ttacccaaccgctgggggccgctctgtgagaatgcctgccagtgtggcctccatgggcac
tgccacgcctcggatggcaactgcacctgcgacgaaggctggtggacccccacctgcgcc
aagcaatgccagtgctacccgggcacctccacctgtgacccactgaccggcaggtgtcat
tgttccatggggtactggggtccgaggtgcaaccggcgctgtagctgctttgtatcgccg
tgccaacagaagacaggggtgtgcgagtgccagaacggttggtggggtccaatgtgtgac
cggcgctgtaactgtaacctgtcgcacagccagtgtgacccggccagcggggattgtctc
tgtcatcccggctacaagggaaagttctgcaacgacccctgtggaccaggggagcatggc
agtggctgcagactaagctgtggtcactgtaaaggaggccagtcgtgctctgctgtcgat
ggtgtttgtttggcctgcgagccggggtggaacggcacacgttgtgaccagccgtgcccg
catggttaccatggagaccactgccaggaggcatgcccacgctgccgaaatagtgaaccg
tgtgacccaaggacaggggtgtgttcacactgtgaaccaggctggactggacccaggtgt
gacgagccatgctccaacaggacatttggggacggctgccgcttcctgtgcaatccctgt
ttccatggccactgtgatcacatgacaggaagttgtgtctgtgggcctgggttccaggga
gaaagctgtaacagcacctgtccagatcatctgtatggcttcaactgtacctctatctgt
gactgtggagagggtgtgtcctgccatccagcaactggggactgtcctttcagtggtcac
agggctctgattgctggtctcctgttccctctcctgttggccttgctgtgtctgctatgt
tgctgctgctgctgtgggggaccaactgatggcaaagacagggtagcggtgggtgatggg
ggaacctctgtccgtgtgaagcatcatgtgtacaacgtcatggccaacgtgagctctgct
gtaccgtgtttctctgtctggtcgtctgggctgcccagagtcacagtgtcccaccatgac
cctgagctgacattcaaccacagcttcatagagcctccctcctcaggctgggtcacggac
gggtcctcctttgacagtgatgaggagactggggaggccctttactgcgtcccccccaga
gaagacatcccagcggtggcgggcggggagtttcaggagttccagcatgagatgacttct
aagtgtaacatcttccccgacccgtcgtccttcagcgtcagcggagaggacatttccctc
ccattcggaatcccccgcacgtccagcatcgccaagtcaaaacgcccctctgtctccttc
gccgagggcaccaagaaatctcatcctaggttcagccccaaggagcgctgtggctccaac
cacgacctgacacccggagccccccgccccaaaccgaagtccccctggggtgtcctggcg
ctgtcggcactccaggctcaaggaggcaagaccttggagggggacgtagcagccgagact
aagggtgaggtagatgaagctggacgtgggactggacctttggatgagccaggatccagt
aatgaagcgggggacccggaggcggaccggttcaccgtcactccttccagagccgtgtcc
ggcctgccgtctggagcagcgctggggcggagacgcaccttgtccaatgcagcttttacc
aggaagggtagccagacgaccgactcctctactgacgcccagctggcagagctgaataac
ggtgtggataaggtcaccacggtgtacgtgacagtggggaaggcaggcgtgggccggccc
gtgtctaaactggagtcccccacctcggagggcccggtccaggctatattacgtcgtctc
ggtagcctccagagacacaaggaccaggaggtggggaccaaactaaaagggaagagcctg
ggagctgaggggatcaccaagccccccaggaggaagctgggggtccgggccagcgtgtgg
gagcagaggtccccggaggtggggagtcaagcggatgagggcgtagcgatgaggaaaccc
agtaggaggaagcagcacactccccacagctccccagctgatatgggaaacactgacgct
ggcactgacactcatccaccaccagaaggcgccactgccaccgctacgcctagaaggccc
ctgtcctccattttgatgagtgtgccggaagtcgatggttcagaggtgaggggtgaggat
ggcaaacccagcatgcagacagagaatggatatctgttggtcggaccccctggagtttta
acggattctgtgagtctcagtgaagtcataaccaataaaggagtggtgaccagtgagggt
gatgaacctaacctatatgagaacgtgcagattatgcattcctaa
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