Esox lucius (northern pike): 105017458
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Entry
105017458 CDS
T04894
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105017458
Spliceosome [BR:
els03041
]
Common components
Common spliceosomal components
General mRNP proteins
105017458
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Rtf2
RSRP
RRM_10
Motif
Other DBs
NCBI-GeneID:
105017458
NCBI-ProteinID:
XP_010880404
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All DBs
Position
LG17:complement(40568297..40586835)
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AA seq
532 aa
AA seq
DB search
MADDFDIEEMLEAPYRKDEIKPISPNGHEERSKKKKKSRSRSRDRKRSKSRDRKKSHDHK
RSKSRERKRSRSKERRRSRSRSRERGGRYRDHKTTFSGPKFNGGSRGKIGPPPVIKLSRR
RSRSRSPFKKEKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVR
MISDRNSRRSKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQVMAEKNRAAAMANN
LQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDA
ECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGAIAIGAMAAVSAAMNPAMNMNMNMNNMNMNTAMNLPSQ
PIATHCFQLSNMFNPQSEDAPGWDVDIQHDVIEECNKHGGVVHIYVDKNSTEGNVYVKCP
TIPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLFPDSVTATQLLIPPARR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactttgacatagaagaaatgcttgaggctccgtatcgaaaggatgagatc
aagcccattagtccgaatggacatgaggaacgcagcaagaagaaaaaaaagagcaggagc
cgaagcagagacaggaagagaagcaagagccgggatcggaagaagagtcatgaccacaag
agaagcaagagccgcgagcgcaagaggagccgcagcaaggaaagacgccggagccgctct
cggagcagggagcgtggtggacgctacagggaccacaagactaccttctctgggccgaaa
tttaacggtggttcgagaggaaagattggccctccacctgtcatcaagctaagccgaaga
cgttccagaagccgaagtcctttcaagaaagagaagagtcctgtgaggcagccaatagac
aacctgactccagaggaacgggatgctcgtactgtgttctgcatgcagctggcagctaga
atccgaccacgtgacctggaagagttcttctctgctgtaggaaaagtgcgagatgtacgg
atgatctctgataggaattcgaggaggtcgaagggtattgcttacatcgagtttgtggag
gccaactcggtgcccctggctataggattgtctggccagcgccttctgggggtgccgatc
attgttcaggcctcacaggtaatggctgagaaaaacagagctgctgccatggccaacaac
cttcaaaagggcaatgctggtccgatgaggctctatgtcggatccttacactttaacatc
acagaggagatgctgagaggaatctttgagccttttggaaggattgaaagtattcagctc
atgatggacagtgagaccgggagatccaaaggatatggcttcatcactttctcggacgct
gagtgtgccaagaaggccctggagcagttgaacgggtttgaactggccggccggcccatg
aaggtgggccatgtgacagagcgcaccgatgcctccactgccagctccttcctggacagc
gatgagctggaaaggacaggcattgacctgggaaccactgggcgcctgcagctcatggcc
agactggctgaaggcacaggattgcagattccaccagctgcgcagcaagccctacaaatg
agtggggccattgctattggtgccatggctgctgtatcagctgccatgaatcctgctatg
aatatgaacatgaacatgaacaatatgaacatgaatactgccatgaacctgccatctcag
ccaattgctacgcactgtttccagctgtcaaacatgttcaaccctcagtctgaagatgcc
ccgggctgggatgttgacattcaacatgatgtcattgaggaatgtaacaaacacggagga
gttgtgcacatatacgttgataagaattcaactgaaggcaatgtgtatgtgaaatgtcca
accattcctgctgccatggctgctgttaatgcgttacatggtcggtattttgcaggtaaa
atgatcacggcggcatacgtccctctcccaacatatcacaatctcttccccgactctgtg
acggctacccaactcctgatacctcctgctcgccgatga
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