Esox lucius (northern pike): 105017761
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Entry
105017761 CDS
T04894
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
els
Esox lucius (northern pike)
Pathway
els04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105017761 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105017761 (trim54)
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105017761 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-RING_6
Sina_RING
Costars
Prok-RING_4
Hemerythrin
DUF1902
CENP-Q
Zn_ribbon_FGT1_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
105017761
NCBI-ProteinID:
XP_010880933
LinkDB
All DBs
Position
LG18:complement(12913072..12924446)
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AA seq
366 aa
AA seq
DB search
MNFAPGYKAGPLGESSTVDSLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAAN
PLRQSRGSTSISTGGRFRCPSCRHEVVLDRHGVFGLQRNLLVENIIDIYKQEESSRPVKP
AQVEQHHRLMCEEHEEEKINIYCLSCEKPTCSMCKVFGQHRDCEVAPLQNIYERQKTELS
DGIAILVAENDRIQALLSQMEELCRTLQENGRRQKQNVCDKFDGLFAILEERKNQLVGMI
SHEQDDKLSYVRSLMRRHGDHLEGAVKLVETAIQSMEEPQMAVFLQSTKDLFQQISTMAK
ASNMERPEPGYESMAHFDINTEDVAYILRSIDFNTGSQGEEGFDLNERGENMASLAAVDI
DTERYQ
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgcgccgggctacaaagccgggccgttgggggagtctagcaccgtggatagc
ttggagaagcagctcatctgccctatctgcctggagatgttcaccaagcctgtggttata
ctgccctgtcaacacaacctctgcaggaagtgtgccaatgacatcttccaggctgccaac
ccgctgaggcagtcccggggctcaacatccatctccacggggggtcgcttccgttgcccg
tcatgtcgtcacgaagttgtgttggaccgacatggtgtgtttggcctgcagaggaacctg
ctagtcgagaacatcatagacatctacaaacaagaagaatccagcaggcctgtgaaacca
gcccaggtggagcagcatcatcggctgatgtgtgaggagcatgaggaggagaagatcaac
atctactgcctgagctgtgagaagcccacctgctccatgtgcaaggtgtttggccagcac
agggactgtgaggtcgctcccctgcagaacatctacgagaggcagaagacagagctgagt
gacggcattgccatcttagtggcggagaatgaccgcatccaggctctcctgtctcagatg
gaggagctctgcagaaccctccaggaaaatgggcgtcgtcagaagcagaatgtgtgtgat
aagtttgatgggctgtttgccatactggaggagaggaagaaccagttggtggggatgatc
agccacgagcaggatgataagctgagctacgttcgctccctcatgcgtcgccatggagac
cacctggagggggcagtcaagctggtggagacagccatccagtccatggaggagccccag
atggctgtctttcttcagagcaccaaggatttatttcaacagatcagcaccatggccaag
gcatccaacatggaacgacctgagccgggctatgagagcatggctcactttgacatcaac
acagaggatgtggcatatatccttaggagtattgacttcaacacaggttcccagggagag
gagggttttgatctgaatgagcggggtgaaaacatggcatcactggcggcggtggatata
gacactgagagataccagtaa
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